PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C011668P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 136aa    MW: 16089.2 Da    PI: 8.9911
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C011668P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.91.4e-1049108463
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      +++rr+++NRe+ArrsR RK++ ++eL      L ++ ++L ++l  l +  ++l +e+
  MELO3C011668P1  49 ERKQRRMISNRESARRSRMRKQKHVKELCSQLLRLCTQKHELEEKLRVLMESQQRLLQEN 108
                     5789****************************************************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.1E-940113No hitNo description
SMARTSM003384.8E-1146110IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.48448111IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.73E-1050101No hitNo description
PfamPF001704.2E-950108IPR004827Basic-leucine zipper domain
CDDcd147025.87E-115199No hitNo description
PROSITE patternPS0003605368IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MEGGAEEKYF WTIQSNDRPD MISSDQFCGP TSCNYNNNNM SSSTERADER KQRRMISNRE  60
SARRSRMRKQ KHVKELCSQL LRLCTQKHEL EEKLRVLMES QQRLLQENAN LKQQASAFRQ  120
ILRDMELEQQ LITQF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16269RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818170.0LN681817.1 Cucumis melo genomic scaffold, anchoredscaffold00015.
GenBankLN7132570.0LN713257.1 Cucumis melo genomic chromosome, chr_3.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008445746.22e-95PREDICTED: basic leucine zipper 43-like
SwissprotQ9FMC21e-20BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A1S3BCY94e-94A0A1S3BCY9_CUCME; basic leucine zipper 43-like
STRINGXP_008445746.11e-94(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3112122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.13e-25basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]