PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C011167P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 321aa    MW: 35471.5 Da    PI: 6.0687
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C011167P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.71.9e-16155208356
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                     +lkr rr+++NR +ArrsR+RK+a ++eLe+ vk+L++eN++L ++l   ++++
  MELO3C011167P1 155 ALKRMRRMISNRDSARRSRRRKQAHLAELENQVKQLKGENETLFNQLLDASQQY 208
                     59*****************************************97776666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.5E-15153217IPR004827Basic-leucine zipper domain
PfamPF001703.8E-14155201IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.898155218IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.7E-12157208No hitNo description
SuperFamilySSF579591.04E-11157206No hitNo description
PROSITE patternPS000360160175IPR004827Basic-leucine zipper domain
CDDcd147021.48E-7175209No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MKRSASELDL EEFLKKAAVI SNNDDVTDPE DDVFKIDDQQ IIIRSPKRGK NFQESPDATY  60
FFSDIDFSYF LVKNNREIMD AIVNCGSGLA EAPLRSQNLT PKRSSFSPTI DSQSSIVSSP  120
MGREHQRGHN SGSSEDQSDD EIEAGCCEQS TDPLALKRMR RMISNRDSAR RSRRRKQAHL  180
AELENQVKQL KGENETLFNQ LLDASQQYRD ANTNNRVLKS DVDALRAKVK LAEDTLARGS  240
MTCSLNQLLQ SHLSTPQPLT ALRRMSTSPL GFSGDEVSYS GVTMSGQNPT AAGIPNSDMH  300
MKTGMGSEAV SCVSGIWPRN *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1169176RRSRRRKQ
2171176SRRRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818231e-155LN681823.1 Cucumis melo genomic scaffold, anchoredscaffold00014.
GenBankLN7132571e-155LN713257.1 Cucumis melo genomic chromosome, chr_3.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008445057.10.0PREDICTED: basic leucine zipper 9
TrEMBLA0A1S3BBS60.0A0A1S3BBS6_CUCME; basic leucine zipper 9
STRINGXP_008445057.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.12e-52basic leucine zipper 9