PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MELO3C010850P1

Organism

Cucumis melo

Taxonomic ID

3656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis

Family

bZIP

Protein Properties

Length: 412aa MW: 44221.6 Da PI: 10.0472

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MELO3C010850P1	genome	MELONOMICS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.1	2.6e-15	333	385	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+++ e+ ++ + MELO3C010850P1 333 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELRQKQAEIMEMQK 385 79****************************************99999988865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.6E-12	329	393	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.461	331	382	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.6E-14	333	382	No hit	No description
SuperFamily	SSF57959	1.19E-10	333	381	No hit	No description
CDD	cd14707	1.25E-25	333	385	No hit	No description
Pfam	PF00170	3.4E-13	333	385	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	336	351	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009738	Biological Process	abscisic acid-activated signaling pathway
GO:0010255	Biological Process	glucose mediated signaling pathway
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0000976	Molecular Function	transcription regulatory region sequence-specific DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence Send to blast
MNFKDFGNDP SAGNGGGGGR PPANYPLARQ SSIYSLTFDE FQSMGSIGKD FGSMNMDELL 60 KNIWSAEEMQ TMASSAAAVG KEGGGSAGGS SGYLQRQGSL TLPRTLSQKK VDEVWKDIIN 120 EHASAKDGAT VAPNLQQRQQ TLGEVTLEEF LFRAGVVRED TQVTANPNNG GFFGNNTGFG 180 IAFQRQAKVP ENNNHIQIQS SNLSLNANGV RAHQPQPIFP KQATLTYGSQ LALPSDGQLA 240 SPGIRGGIMG IADQGLNTNL MQGSALQGGR MGVVNIAAAP LPIATESPGN QLSSDGIGKS 300 NGDTSSVSPV PYALNGGIRG RRGNGIVDKV VERRQRRMIK NRESAARSRA RKQAYTMELE 360 AEVAKLKEEN QELRQKQAEI MEMQKNRALE VMDKQQGIKK QCLRRTQTGP W*

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence Send to blast

MNFKDFGNDP SAGNGGGGGR PPANYPLARQ SSIYSLTFDE FQSMGSIGKD FGSMNMDELL  60
KNIWSAEEMQ TMASSAAAVG KEGGGSAGGS SGYLQRQGSL TLPRTLSQKK VDEVWKDIIN  120
EHASAKDGAT VAPNLQQRQQ TLGEVTLEEF LFRAGVVRED TQVTANPNNG GFFGNNTGFG  180
IAFQRQAKVP ENNNHIQIQS SNLSLNANGV RAHQPQPIFP KQATLTYGSQ LALPSDGQLA  240
SPGIRGGIMG IADQGLNTNL MQGSALQGGR MGVVNIAAAP LPIATESPGN QLSSDGIGKS  300
NGDTSSVSPV PYALNGGIRG RRGNGIVDKV VERRQRRMIK NRESAARSRA RKQAYTMELE  360
AEVAKLKEEN QELRQKQAEI MEMQKNRALE VMDKQQGIKK QCLRRTQTGP W*

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00186	DAP	Transfer from AT1G45249	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	LN681823	0.0	LN681823.1 Cucumis melo genomic scaffold, anchoredscaffold00014.
GenBank	LN713257	0.0	LN713257.1 Cucumis melo genomic chromosome, chr_3.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008444613.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
Swissprot	Q9M7Q4	1e-131	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A1S3BBK0	0.0	A0A1S3BBK0_CUCME; ABSCISIC ACID-INSENSITIVE 5-like protein 5
STRING	XP_008444613.1	0.0	(Cucumis melo)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1962	34	81

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-103	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]