PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MELO3C010788P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family | bZIP | ||||||||
Protein Properties | Length: 151aa MW: 17434.8 Da PI: 8.0861 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.2 | 3.1e-12 | 67 | 115 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 ++ rr+++NRe+ArrsR RKk +e L+++v L +N++Lk++l ++ MELO3C010788P1 67 RKLRRMISNRESARRSRWRKKRHLEDLTNEVNRLMMQNRELKDRLGRIL 115 6789***************************************999875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-10 | 60 | 113 | No hit | No description |
SMART | SM00338 | 1.4E-10 | 63 | 127 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.404 | 65 | 114 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.7E-10 | 66 | 114 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.69E-11 | 67 | 120 | No hit | No description |
CDD | cd14702 | 4.44E-15 | 68 | 115 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 70 | 85 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence Send to blast |
MAMLNMGEDG VGFQCEVPDQ NNHEFTATEI EELLSLFLAN DGPPSPGSDS QGSLRTSATC 60 STNENERKLR RMISNRESAR RSRWRKKRHL EDLTNEVNRL MMQNRELKDR LGRILNSRHM 120 VMRENDWLWM ESVGLRARLS DLCRILAVMQ * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | LN681823 | 0.0 | LN681823.1 Cucumis melo genomic scaffold, anchoredscaffold00014. | |||
GenBank | LN713257 | 0.0 | LN713257.1 Cucumis melo genomic chromosome, chr_3. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008444526.1 | 1e-106 | PREDICTED: basic leucine zipper 8 | ||||
TrEMBL | A0A1S3BAH5 | 1e-105 | A0A1S3BAH5_CUCME; basic leucine zipper 8 | ||||
STRING | XP_008444526.1 | 1e-106 | (Cucumis melo) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5996 | 30 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59530.1 | 8e-17 | basic leucine-zipper 4 |