PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C009647P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 386aa    MW: 43935.4 Da    PI: 9.5956
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C009647P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.61e-1199153563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     k  rr+++NReAAr+sR+RKka++++Le    +L++      +el++ +++v +lk  +
  MELO3C009647P1  99 KTLRRLAQNREAARKSRLRKKAYVQQLEMSRIKLTQLE----QELQRARNQVNYLKLIN 153
                     7789************************9888887766....48889999999998766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-1093150No hitNo description
SMARTSM003382.1E-995155IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.16397141IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.06E-799150No hitNo description
PfamPF001709.2E-999153IPR004827Basic-leucine zipper domain
PROSITE patternPS000360102117IPR004827Basic-leucine zipper domain
PfamPF141442.8E-31185259IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MRPPTLNIFP SQPMHVDSLP IKGNTTLINH GGDSKIKASE PSKELANQRS NGGAIASAPA  60
PTQTTTTTEP HPKPPKRDPS KKGLTSSSEQ EGPKTPDPKT LRRLAQNREA ARKSRLRKKA  120
YVQQLEMSRI KLTQLEQELQ RARNQVNYLK LINKLIKLNY FFSNWYAAVF DIEYGRWQEE  180
HHRLMCELRA AVQEHLPENE LRLYVDSCLA HYDEVLNLKM MVAKSDIFHL VSGMWKTPAE  240
RCFMWMGDFR PSELIKIIMG QIEPLTEHQI LNICALQQST QESEEALSQG LEALNQSLSD  300
TITSDSLSSP PNMANYMGQM TLAINKLSTL EGFVRQADNL RHQTVHRLQQ MLTTRQAARC  360
LLAIAEYFHR LRALSSLWLA RPRQD*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818411e-150LN681841.1 Cucumis melo genomic scaffold, anchoredscaffold00011.
GenBankLN7132581e-150LN713258.1 Cucumis melo genomic chromosome, chr_4.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008443080.10.0PREDICTED: transcription factor HBP-1b(c38) isoform X1
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A1S3B7760.0A0A1S3B776_CUCME; transcription factor HBP-1b(C38) isoform X1
STRINGXP_008443081.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-142bZIP family protein