PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C009455P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 595aa    MW: 65911.6 Da    PI: 6.9035
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C009455P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.31.4e-07244306163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     eke +r rr   NRe+Ar   +R++a +eeL++k++ L  eN+ Lk e e   ke+++l++ +
  MELO3C009455P1 244 EKEERRIRRILANRESARQTIRRRQALCEELTRKAADLAWENENLKREKELALKEYQSLETTN 306
                     78999*****************************************************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.4E-11244308IPR004827Basic-leucine zipper domain
PfamPF001701.3E-6244306IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.921246309IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.0E-5248301No hitNo description
Gene3DG3DSA:1.20.5.1701.0E-4248313No hitNo description
CDDcd147023.92E-13249300No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 595 aa     Download sequence    Send to blast
MVRSLQFLYG GTATCNNYTS ADSITWLSLI HGDAQVFTHH PHALSSLFTP SLLSSFFFSS  60
VMGSPPLTLM AASSSKCSDG TTSSSSSSSS SSSSSSSSFM PSSMAKAADQ MVKVEIEAAE  120
ALAGLAVLAV RETGTQPSQT KWGIKGKGKR ARKEFKTESP ISGFADSLPA RADLDLRIEQ  180
DRGVVKHQPS EKECTNQSQH EPETTREVTK MDKEAESSKV SPASTTSYQL FGCRRSRRNL  240
TEAEKEERRI RRILANRESA RQTIRRRQAL CEELTRKAAD LAWENENLKR EKELALKEYQ  300
SLETTNKELK EQLAEAVKPK VEEIPGNHIS SHVQMPPLPS NCPLFLFSRF PYFWPSVVQS  360
TSSYHELPNV IVVPSSINLP ANNNASVSGS SQTQENFTNV TGSRAPFCML PPCSWLLPHH  420
DFRNQQSPQI WFPAGNDQED IYSKSQDSAI TSKVVHAESR HSAEEENDAP DLNEAPSLDE  480
SSNPKDDTQN TVGVAVEGFD TNARAPVRKV LSPVRLECIE PSSAAKLDNW NEDDHGVSSR  540
TCDDLCYFAE RRHEPEIVPC KKSIDAMAAT EARRRRKELT KVKNLYARQC RMQS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1572577RRRRKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818410.0LN681841.1 Cucumis melo genomic scaffold, anchoredscaffold00011.
GenBankLN7132580.0LN713258.1 Cucumis melo genomic chromosome, chr_4.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008442820.20.0PREDICTED: uncharacterized protein LOC103486593 isoform X2
TrEMBLA0A1S3B7D80.0A0A1S3B7D8_CUCME; uncharacterized protein LOC103486593 isoform X2
STRINGXP_008442819.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF64002834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.16e-56bZIP family protein