PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C008128P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 368aa    MW: 42245.9 Da    PI: 6.9602
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C008128P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.42e-1074115344
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                     ++k++rr+++NReAAr+sR RKk ++++Le+   +L +  ++
  MELO3C008128P1  74 DDKVQRRLAQNREAARKSRMRKKVYVQQLETSRMKLAQLEEE 115
                     589***************************865555544443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-572129IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.38174118IPR004827Basic-leucine zipper domain
PfamPF001707.0E-775116IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.0E-876121No hitNo description
SuperFamilySSF579592.33E-776119No hitNo description
PROSITE patternPS0003607994IPR004827Basic-leucine zipper domain
PfamPF141445.1E-29161236IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MSSSSTQLYA SRMGIYEPFH QINSWPTNAF GSRLDTSISP INKVDDCVDN KPEFVPFESM  60
DHLESSEEMN KPIDDKVQRR LAQNREAARK SRMRKKVYVQ QLETSRMKLA QLEEELERTR  120
QQKGTGCLVD TSHFGFSGLV NPGIAAFEME YNHWVEEQQR QINELRKALQ VHTTDIELQI  180
LVESSLNHYH NLFCMKAKVA KADVFYLMSG VWRSSAERFF LWIGGFRPSE LLNVLKPYFE  240
PLNEQQRADI HKLQQSSRQA EDALTQGMEK LHQNLSLSIA GDPVGSYISQ MGDGMEKLEA  300
LENFISQPSV CYSFLEQADH LRQQTLKRMS HLLTTRQAAQ GLLALGEYFH RLRVLSSLWA  360
TRPREPA*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00247DAPTransfer from AT1G77920Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818151e-153LN681815.1 Cucumis melo genomic scaffold, anchoredscaffold00008.
GenBankLN7132571e-153LN713257.1 Cucumis melo genomic chromosome, chr_3.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008441233.10.0PREDICTED: transcription factor TGA7-like isoform X1
RefseqXP_008441234.10.0PREDICTED: transcription factor TGA7-like isoform X1
RefseqXP_008441235.10.0PREDICTED: transcription factor TGA7-like isoform X1
SwissprotQ93ZE21e-136TGA7_ARATH; Transcription factor TGA7
TrEMBLA0A1S3B3L80.0A0A1S3B3L8_CUCME; transcription factor TGA7-like isoform X1
STRINGXP_008441233.10.0(Cucumis melo)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.11e-134bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]