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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MELO3C005298P1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
GRAS |
Protein Properties |
Length: 587aa MW: 64910.3 Da PI: 4.9888 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C005298P1 | genome | MELONOMICS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 451.9 | 4.2e-138 | 218 | 577 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
lv++L++cAeav++++l+ a+al++r+ la +++ +m+++a++f+eALa+r++r l p++ ++++s++l++ f+e +P+lkf+h
MELO3C005298P1 218 LVHALMACAEAVQQNNLNIAEALVKRIGYLAVSQAGAMRKVATFFAEALARRIYR--------LCPENPLDHSVSDRLQM--HFYESCPYLKFAH 302
689****************************************************........43444444557777666..5************ PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
+taNqaIlea+eg++rvH+iDf+++ G+QWpaL+qaLa Rp+gpp +R+Tg+g+p++++++ l+e+g++La++Ae+++v+fe++ +va++l+dl+
MELO3C005298P1 303 FTANQAILEAFEGKKRVHVIDFSMNRGMQWPALIQALALRPNGPPAFRLTGIGPPAPDNSDYLQEVGWKLAELAEAIHVDFEYRGFVANSLADLD 397
*********************************************************************************************** PP
GRAS 191 leeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
++L+++p E+++Vn+v++lh+ll+++++le+ vL++vk+++P++++vveqea+hn++ F++rf+e+l+yys+lfdsle + +++++
MELO3C005298P1 398 ASMLELRPseVESVVVNSVFELHKLLARPGALEK----VLSVVKQMKPEIMTVVEQEANHNGPVFVDRFTESLHYYSTLFDSLEGS---PNNQDK 485
********88899*********************....**********************************************99...688999 PP
GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
+++++lg++i+nvvacega+r+erhetl +W+ rl++aGF+p++l+++a kqa++ll+ ++ ++gyrvee++gsl+lgW++rpL+++SaW+
MELO3C005298P1 486 IMSEMYLGKQICNVVACEGADRVERHETLTQWQTRLSSAGFEPIHLGSNAFKQASMLLALFGsGEGYRVEENNGSLMLGWHTRPLIATSAWK 577
9999***************************************************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009723 | Biological Process | response to ethylene |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
GO:0010187 | Biological Process | negative regulation of seed germination |
GO:0010218 | Biological Process | response to far red light |
GO:0042176 | Biological Process | regulation of protein catabolic process |
GO:0042538 | Biological Process | hyperosmotic salinity response |
GO:2000033 | Biological Process | regulation of seed dormancy process |
GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 587 aa
Download sequence Send
to blast |
MKREHHHLHP RPEPPSMAAV PNGESFLNTG KAKLWEEEAQ LDGGMDELLA VLGYKVKSSD 60 MADVAQKLEQ LEEAMCQVQD TGLSHLAFDT VHYNPSDLST WLESMLTELH PMPNFATPPP 120 PSQLDDSSFL APAESSTITS IDYDPQRQTS SRIFEESSSS DYDLKAITSS AIYSPRENKR 180 LKSSESDSDV FSTSAIGASD SVTRPVVLVD SQENGIQLVH ALMACAEAVQ QNNLNIAEAL 240 VKRIGYLAVS QAGAMRKVAT FFAEALARRI YRLCPENPLD HSVSDRLQMH FYESCPYLKF 300 AHFTANQAIL EAFEGKKRVH VIDFSMNRGM QWPALIQALA LRPNGPPAFR LTGIGPPAPD 360 NSDYLQEVGW KLAELAEAIH VDFEYRGFVA NSLADLDASM LELRPSEVES VVVNSVFELH 420 KLLARPGALE KVLSVVKQMK PEIMTVVEQE ANHNGPVFVD RFTESLHYYS TLFDSLEGSP 480 NNQDKIMSEM YLGKQICNVV ACEGADRVER HETLTQWQTR LSSAGFEPIH LGSNAFKQAS 540 MLLALFGSGE GYRVEENNGS LMLGWHTRPL IATSAWKLGN NSVVAH*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that represses transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). {ECO:0000250}. |