PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C003794P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 181aa    MW: 21046.4 Da    PI: 6.717
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C003794P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.62.4e-123685554
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54
                    ++ +r+q+NRe+ArrsR RK++ ++ L   v +L     +++++++  ++
  MELO3C003794P1 36 RKRKRMQSNRESARRSRMRKQQHLDGLMAQVSQLRDNKNQMISRINLTTQ 85
                    6789******************************99999*****998776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.7E-92982No hitNo description
SMARTSM003383.4E-163296IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.8183497IPR004827Basic-leucine zipper domain
PfamPF001704.1E-93682IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.08E-113687No hitNo description
CDDcd147029.89E-173787No hitNo description
PROSITE patternPS0003603954IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MDCSSGNSSG SLCEQIVVQN QSSGSEAELK QLMDQRKRKR MQSNRESARR SRMRKQQHLD  60
GLMAQVSQLR DNKNQMISRI NLTTQLFLNI EAENSVLRAQ ILELTHRLES LNQILSHINN  120
NDDDEQQQRQ QQHNNNFLQD FCDNFDEFDL NPLFINSLFF TPQQQQPPIM ASAHHHLLHY  180
*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14855RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818240.0LN681824.1 Cucumis melo genomic scaffold, anchoredscaffold01596.
GenBankLN7132580.0LN713258.1 Cucumis melo genomic chromosome, chr_4.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016903559.11e-128PREDICTED: bZIP transcription factor 53-like
TrEMBLA0A1S4E5Q81e-127A0A1S4E5Q8_CUCME; bZIP transcription factor 53-like
STRINGXP_008466523.11e-127(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2483133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.15e-38basic leucine-zipper 44