PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla020427
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family G2-like
Protein Properties Length: 451aa    MW: 51151.7 Da    PI: 6.1493
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla020427genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like635.7e-20169222155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                k r++W+++LH++F ea+++L G+ k  Pk il++m+ + Ltl +v+SHLQk+++
  Cla020427 169 KSRIVWNSKLHRKFTEALSKL-GNRKSSPKIILKMMNEPTLTLRQVASHLQKFKS 222
                68*******************.9******************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521722.25E-52183IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23002.0E-53183No hitNo description
Gene3DG3DSA:3.40.50.23002.0E-5150169No hitNo description
SuperFamilySSF466891.33E-13166225IPR009057Homeodomain-like
TIGRFAMsTIGR015579.0E-18169222IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.1E-19170226IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MVIEEKDEPF NLAMANATES NMNALSILHQ TGIPIILMSP EMDMKTAGRA VAEWGCHFLE  60
KPISMEDIEL VWQIVYRKIR NPRAKNLGEN AKHGKKSQID GMFGRIVNVT RGVEWKSLEE  120
EKEEKGKNGG KCREGEEKLN PAVNVLDYLE TKKMNVEENT NRNELTNKKS RIVWNSKLHR  180
KFTEALSKLG NRKSSPKIIL KMMNEPTLTL RQVASHLQKF KSQVKHLNKI TANDASSNSL  240
VKNKLQQLPA KRNSMTNILS QPSYSSNYIT DHNLRQLQVP SCLIPPTLLP SQDVFNCHLK  300
MMNQNNSNSY NTTHPNDLQL KSYGGLFEGM NLVEGNCTFA DELYMNNQSL EGFVQTSHYS  360
NFQYFGADED CSFQDQLEYS QNFAGCSDVD NNIVTSGAQS VIAGRSLNQN VALKELDDLL  420
NNTEEDPMVY CCHDGEMNSF DIDQYSEWLN A
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011655794.10.0PREDICTED: two-component response regulator ARR2-like
TrEMBLA0A1S3BGE10.0A0A1S3BGE1_CUCME; two-component response regulator ORR24-like
STRINGXP_008447014.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2482233
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68210.12e-19pseudo-response regulator 6