PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla017522
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family bZIP
Protein Properties Length: 393aa    MW: 44264.9 Da    PI: 7.5023
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla017522genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.73.8e-11223260542
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 
                k  rr+++NReAAr+sR+RKka++++Le    +L++  
  Cla017522 223 KTLRRLAQNREAARKSRLRKKAYVQQLEMSRIKLTQLE 260
                7789***********************97555555544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.6E-9216265No hitNo description
SMARTSM003383.0E-5219274IPR004827Basic-leucine zipper domain
PfamPF077162.0E-8220265IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.163221265IPR004827Basic-leucine zipper domain
CDDcd147082.73E-25223275No hitNo description
SuperFamilySSF579593.87E-7223265No hitNo description
PROSITE patternPS000360226241IPR004827Basic-leucine zipper domain
PfamPF141449.0E-31315387IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MASSNIKSTS IIQQANQQEE EKQQQQQLLL HHQQQQPQLL QTPSFVISSN SKNSSLFNFQ  60
NPNFPDHHHH HHQLPFSMNL PSIPSNFLSK DGGGDDLGEL DQALFLYLDG QEPSTTTTQD  120
QRQSLGMRPP TLNIFPSQPM HVDPLPIKGN TALINHSDSK IKASEPSREL ANQRSSNGAT  180
ASGPPPTQTT TTEPHPKPPK REPNKKGLTS SSEQEGPKTP DPKTLRRLAQ NREAARKSRL  240
RKKAYVQQLE MSRIKLTQLE QELQRARTQG MFLGGGAAIL GPDQGLPSGF YNLSSDAAVF  300
DIEYGRWQEE HHRLMCELRA AVQEQLPENE LRLFVDSCLA HYDEVLNLKM MVAKSDVFHL  360
VSGMWKTPAE RCFMWMGDFR PSELIKVPFT III
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818414e-89LN681841.1 Cucumis melo genomic scaffold, anchoredscaffold00011.
GenBankLN7132584e-89LN713258.1 Cucumis melo genomic chromosome, chr_4.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023540200.10.0bZIP transcription factor TGA10-like
SwissprotQ52MZ21e-144TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A1S3B7A00.0A0A1S3B7A0_CUCME; transcription factor HBP-1b(C38) isoform X2
STRINGXP_008443081.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-103bZIP family protein