PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cla016491 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family | bZIP | ||||||||
Protein Properties | Length: 184aa MW: 21619 Da PI: 6.6305 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50.1 | 6.2e-16 | 86 | 144 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++rr+++NRe+ArrsR RK++ ++eL v L +eN++L+++l++ ++ +k+ +e+ Cla016491 86 RKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNQVSDCHDKVVQEN 144 689********************************************998877776665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.4E-15 | 82 | 146 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.427 | 84 | 147 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.1E-12 | 86 | 159 | No hit | No description |
SuperFamily | SSF57959 | 8.13E-14 | 86 | 135 | No hit | No description |
Pfam | PF00170 | 5.3E-14 | 86 | 143 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 3.92E-19 | 87 | 138 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 89 | 104 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence Send to blast |
MQPGEVTSLQ YLIPSNLSPY ATHFPMAQNN LPTMQLNEFS NNEFSNPLYN FQGPSQVHDF 60 NRHPCLSSNS TSDEADEQQQ SLINERKQRR MISNRESARR SRMRKQKHLD ELWSQVVWLR 120 NENHQLIDKL NQVSDCHDKV VQENAQLKEQ TSELRRMLTE VQVNSHYPNF RELEKIPPNT 180 PSES |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 98 | 105 | RRSRMRKQ |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00389 | DAP | Transfer from AT3G30530 | Download |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | LN681889 | 0.0 | LN681889.1 Cucumis melo genomic scaffold, anchoredscaffold00051. | |||
GenBank | LN713263 | 0.0 | LN713263.1 Cucumis melo genomic chromosome, chr_9. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004141481.1 | 1e-120 | PREDICTED: basic leucine zipper 43-like | ||||
TrEMBL | E5GCT0 | 1e-122 | E5GCT0_CUCME; BZIP transcription factor | ||||
STRING | XP_008459417.1 | 1e-122 | (Cucumis melo) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1604 | 33 | 99 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 7e-53 | basic leucine-zipper 42 |