PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cla009655

Organism

Citrullus lanatus

Taxonomic ID

3654

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus

Family

VOZ

Protein Properties

Length: 493aa MW: 55027.1 Da PI: 6.2366

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cla009655	genome	ICuGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	441.4	1.1e-135	218	434	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdlsl 100 ppp+aflgpkcalwdc+rpaqg++w++dycssfha+lalneg+pg+ pvlrp+gi+lkdgllfaalsak+qgk+vgipecegaatakspwna+elfdls+ Cla009655 218 PPPAAFLGPKCALWDCPRPAQGMDWCEDYCSSFHAALALNEGPPGMGPVLRPGGIGLKDGLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSI 317 89************************************************************************************************ PP VOZ 101 legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgkv 200 lege irewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyein++da+alyrlelklvd+kk +k+kv Cla009655 318 LEGEMIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKYDACALYRLELKLVDGKKGSKAKV 417 ************************************************************************************************ PP VOZ 201 skdsladlqkklgrlta 217 s+ds+adlq+++grlta Cla009655 418 SNDSVADLQRQMGRLTA 434 *************97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence Send to blast
MGKHSKTSCK SASHKLFKDK AKNRVDDLQS IFVDLQYARK ESRTVDVTVL EEQVHQMLRE 60 WKAELNEPSP ASSLQQGGSL GSFSSDICRL LQLCEEDDDA SSPLAAPKPE PNEQNLQVGD 120 TMALQEVLSV TINLLQGYNV NHGHQEPSFP LVDQCKNSPS GVHGMAMNNL EGPTQLECHQ 180 FDLHQGIEHN FYSILNGRGL CGEGAIPHVS SYCPSICPPP AAFLGPKCAL WDCPRPAQGM 240 DWCEDYCSSF HAALALNEGP PGMGPVLRPG GIGLKDGLLF AALSAKAQGK DVGIPECEGA 300 ATAKSPWNAP ELFDLSILEG EMIREWLFFD KPRRAFESGN RKQRSLPDYS GRGWHESRKQ 360 VMNEFGGLKR SYYMDPQPLN HFEWHLYEYE INKYDACALY RLELKLVDGK KGSKAKVSND 420 SVADLQRQMG RLTAEFPDNK RFVKGRTRIN TKVGLGNVYP SANRVMPPNG TYDYMLHAQY 480 DYLVENLSEY YLT

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence Send to blast

MGKHSKTSCK SASHKLFKDK AKNRVDDLQS IFVDLQYARK ESRTVDVTVL EEQVHQMLRE  60
WKAELNEPSP ASSLQQGGSL GSFSSDICRL LQLCEEDDDA SSPLAAPKPE PNEQNLQVGD  120
TMALQEVLSV TINLLQGYNV NHGHQEPSFP LVDQCKNSPS GVHGMAMNNL EGPTQLECHQ  180
FDLHQGIEHN FYSILNGRGL CGEGAIPHVS SYCPSICPPP AAFLGPKCAL WDCPRPAQGM  240
DWCEDYCSSF HAALALNEGP PGMGPVLRPG GIGLKDGLLF AALSAKAQGK DVGIPECEGA  300
ATAKSPWNAP ELFDLSILEG EMIREWLFFD KPRRAFESGN RKQRSLPDYS GRGWHESRKQ  360
VMNEFGGLKR SYYMDPQPLN HFEWHLYEYE INKYDACALY RLELKLVDGK KGSKAKVSND  420
SVADLQRQMG RLTAEFPDNK RFVKGRTRIN TKVGLGNVYP SANRVMPPNG TYDYMLHAQY  480
DYLVENLSEY YLT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	LN681875	0.0	LN681875.1 Cucumis melo genomic scaffold, anchoredscaffold00007.
GenBank	LN713262	0.0	LN713262.1 Cucumis melo genomic chromosome, chr_8.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004134679.1	0.0	PREDICTED: transcription factor VOZ1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A1S3B082	0.0	A0A1S3B082_CUCME; transcription factor VOZ1
STRING	XP_004134679.1	0.0	(Cucumis sativus)
STRING	XP_004155552.1	0.0	(Cucumis sativus)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]