PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cc02_g09360

Common Name

GSCOC_T00029663001

Organism

Coffea canephora

Taxonomic ID

49390

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 306aa MW: 33922.2 Da PI: 7.8092

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cc02_g09360	genome	CGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.2	6.1e-07	187	231	18	62
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 18 rrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +rsR RK+++i+eLe+ v L++ +++++++ +l + +l e Cc02_g09360 187 QRSRVRKLQYIAELERTVNILQKVEMDMASKVASLVRQRLALSLE 231 79*****************************99998877766655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd14703	2.65E-11	182	225	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.5E-5	187	228	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence Send to blast
MSRQAHLPPR CPFQKKTISR HDPALPTLDN HIYLHTRHHK SVSQSSIGEE KPAWLDDLLD 60 DSDSNSGYIL HRRSASDSLT LLDDHVPLAS INQLSGSDTP ASCESDGSLE SASIYGPNSP 120 RAKGKISFPE NAIVSALSEY VSHEHLWHLN DSICASGAAN LESVEDTRGS AGEMIAETKP 180 VKRYPGQRSR VRKLQYIAEL ERTVNILQKV EMDMASKVAS LVRQRLALSL ENNKLKQRAL 240 RLQHEKQIVD GQYKSLRKEV ERLKTYLAHA HGSKVSTNFS LSSHAELASA EATWQMLDMG 300 KLDLS*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027104706.1	0.0	basic leucine zipper 34-like
Refseq	XP_027104707.1	0.0	basic leucine zipper 34-like
Refseq	XP_027104708.1	0.0	basic leucine zipper 34-like
TrEMBL	A0A068TUK6	0.0	A0A068TUK6_COFCA; Uncharacterized protein
STRING	PGSC0003DMT400005064	1e-122	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA11817	4	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	2e-17	bZIP family protein