PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ciclev10027415m | ||||||||
Common Name | CICLE_v10027415mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bZIP | ||||||||
Protein Properties | Length: 162aa MW: 18479.8 Da PI: 8.9261 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.6 | 1.3e-13 | 21 | 81 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ rerr+ NReAArrsR RK+++ +L + ++eN + + ++ ++ +++l +e+ Ciclev10027415m 21 DDYRERRMKANREAARRSRMRKQEYFHHLIADISRYQKENGQIRAMISLVTQAYSNLMNEN 81 5679***************************************************998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.5E-16 | 19 | 83 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.013 | 21 | 84 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.48E-16 | 24 | 75 | No hit | No description |
Pfam | PF00170 | 1.6E-9 | 24 | 81 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.1E-11 | 24 | 91 | No hit | No description |
SuperFamily | SSF57959 | 2.0E-10 | 24 | 78 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 26 | 41 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence Send to blast |
MASSSGNYSI RSDMLQNSTS DDYRERRMKA NREAARRSRM RKQEYFHHLI ADISRYQKEN 60 GQIRAMISLV TQAYSNLMNE NAVLRSQLAQ LQHRLHSLNG LIASTNAVYF DQPATLQFLA 120 NCTSNELIVD DYLGNSDTFN YPYLSQPTIT VPPFNNGLFM L* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 35 | 42 | RRSRMRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006425616.1 | 1e-117 | bZIP transcription factor 44 | ||||
TrEMBL | V4SP41 | 1e-115 | V4SP41_9ROSI; Uncharacterized protein | ||||
STRING | XP_006425616.1 | 1e-116 | (Citrus clementina) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.1 | 7e-23 | basic leucine-zipper 44 |
Link Out ? help Back to Top | |
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Phytozome | Ciclev10027415m |
Entrez Gene | 18037729 |