PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ciclev10015092m
Common NameCICLE_v10015064mg
Organism
Citrus clementina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family VOZ
Protein Properties Length: 480aa    MW: 53292.7 Da    PI: 5.4831
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ciclev10015092mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ442.64.9e-1362024181217
              VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaae 94 
                      pppsaflgpkcalwdc+rpaqg++w+qdycs fha+la+ eg+pg+ pvlrp+gi+lkdgllfaalsa++qgk+vgipecegaatakspwna+e
  Ciclev10015092m 202 PPPSAFLGPKCALWDCPRPAQGVDWYQDYCSGFHAALAFSEGPPGMGPVLRPGGIGLKDGLLFAALSARAQGKDVGIPECEGAATAKSPWNAPE 295
                      89******************************************************************************************** PP

              VOZ  95 lfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelk 188
                      lfdls+legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyein++da+alyrlelk
  Ciclev10015092m 296 LFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKCDACALYRLELK 389
                      ********************************************************************************************** PP

              VOZ 189 lvdekksakgkvskdsladlqkklgrlta 217
                      lvd+kksakgk+++ds+adlqk++grlta
  Ciclev10015092m 390 LVDGKKSAKGKLANDSVADLQKQMGRLTA 418
                      ***************************97 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009408Biological Processresponse to heat
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MVGKGAKTNC NSASHKLFKD KAKTRVDDLQ GKFLDLQFAR KESRTVDVSL LEEQVHQMLR  60
EWKAELHEPS PASSLQQDGS LGFSSDIYRL LQLCEEEDDA TSTLTAPKPE PNDQVLPVTD  120
TAVYHEGEQQ HSFPLVDQCK NSSSGVHSTA INSLEGSTLL DYHHFDLHQE FEQNFYAGYN  180
VSNFCGEDAM QQISGYLPGI CPPPSAFLGP KCALWDCPRP AQGVDWYQDY CSGFHAALAF  240
SEGPPGMGPV LRPGGIGLKD GLLFAALSAR AQGKDVGIPE CEGAATAKSP WNAPELFDLS  300
VLEGETIREW LFFDKPRRAF ESGNRKQRSL PDYSGRGWHE SRKQVMNEFG GLKRSYYMDP  360
QPLNHFEWHL YEYEINKCDA CALYRLELKL VDGKKSAKGK LANDSVADLQ KQMGRLTAEF  420
PSDNKRLVKG RAKVNAKAGV GGNIYPASNV VASTNEKFDY GPTGQFDYLI ENLSEYYLT*
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006449426.10.0transcription factor VOZ1 isoform X2
SwissprotQ9SGQ00.0VOZ1_ARATH; Transcription factor VOZ1
TrEMBLV4UK490.0V4UK49_9ROSI; Uncharacterized protein
STRINGXP_006449425.10.0(Citrus clementina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.20.0vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]