PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_45971

Common Name

KK1_047745

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

Dof

Protein Properties

Length: 198aa MW: 21641.9 Da PI: 8.4145

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_45971	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	44.9	2.5e-14	15	40	36	60
zf-Dof 36 C.rryWtkGGalrnvPvGggrrknkk 60 C rryWt+GG+lrnvPvGgg+rknk+ C.cajan_45971 15 CpRRYWTEGGSLRNVPVGGGSRKNKR 40 549*********************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-9	2	40	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	4.8E-9	15	40	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence Send to blast
MEKRARPQKD QALNCPRRYW TEGGSLRNVP VGGGSRKNKR PTPASSSSSP STPSSTKKFP 60 DLATPQNFPQ NSSQTPKIHQ GQDLNLAYPP VEDYSTISKF IGLNSFMAMP VSDSSTMYNS 120 TGFPFQDFKP GLSFSLEGFE NGYGGDLQGI QEGEGARILF PVEDLKSQQI TKNAEFEPNR 180 SQGDSTGYWN GMLGGGSW

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_45971

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020208745.1	1e-117	dof zinc finger protein DOF4.6
TrEMBL	A0A151QN91	1e-143	A0A151QN91_CAJCA; Dof zinc finger protein DOF3.7
STRING	XP_007161354.1	2e-80	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF674	34	137

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61850.3	8e-24	Dof family protein