PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_44324
Common NameKK1_044540
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GRAS
Protein Properties Length: 484aa    MW: 54624.8 Da    PI: 4.6818
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_44324genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS316.55.9e-9713448021374
           GRAS  21 qalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHii 115
                    +++L++  +++ p g+++    +yf+ +L+ rl++  ++ + a  ++ + +  + +++l a++l+++ +P++ f++++aN+aI +a +g+  +Hi+
  C.cajan_44324 134 TTILEEKVQMCGPFGTTIP--EFYFATGLKCRLSSVLPHNVIANgAAMDVPLITRENKLEAFQLLYQNTPYIAFGFMAANEAICQASQGKCSIHIV 227
                    5566666666666666665..48************76665443326666666679999************************************** PP

           GRAS 116 DfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak.rledleleeLrvkpgEalaVnlvlql 210
                    D+ +++ lQW +L++aLasR+egpp+lRiTg+ s+e  ++ +l++  + L + A++lg+++ef+++ +  + + l++e+L++++gEal Vn++lql
  C.cajan_44324 228 DLAMEHTLQWSSLIRALASRTEGPPTLRITGLTSNE--DSPKLQSSMNVLVEEATSLGMHLEFHMISEPaSPSLLTMENLNLRKGEALFVNSILQL 321
                    **********************************55..9**************************8443488999********************* PP

           GRAS 211 hrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerr 306
                    h+ ++es    +   e+L  +k+l P+ ++vveq+++hn++ Fl rfle+l+yysa+fdslea++ r+s++r+k+Er  +++ei+n+va eg +r+
  C.cajan_44324 322 HKYVKESRGYLK---EILLSIKRLGPTALTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEASMLRNSQHRMKIERLHFAEEIRNIVAYEGPDRT 414
                    ****88877777...9******************************************************************************** PP

           GRAS 307 erhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                    erhe++ +Wr++l++aGF+ +pl+   ++qa+++l+ ++ dgy++ +e+g l+lgWk+rp++++SaW+
  C.cajan_44324 415 ERHERVDQWRRQLGRAGFQVMPLK--CTSQARMMLSVYDCDGYTLSSEKGNLLLGWKGRPVMMASAWQ 480
                    ***********************7..679**************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098545.02583462IPR005202Transcription factor GRAS
PfamPF035142.0E-94134480IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MEGINRWLSF YVNESVNHDF AIRRYCPARM EQEQGGECQD QEALVFYDTE LCSSDATSST  60
PCLASSEVDD FVDSFINMDQ YGYENEGQGE KHQSFDLAKD DADADAYSMV NGVFGYVPTT  120
MEDSELEIYE DLTTTILEEK VQMCGPFGTT IPEFYFATGL KCRLSSVLPH NVIANGAAMD  180
VPLITRENKL EAFQLLYQNT PYIAFGFMAA NEAICQASQG KCSIHIVDLA MEHTLQWSSL  240
IRALASRTEG PPTLRITGLT SNEDSPKLQS SMNVLVEEAT SLGMHLEFHM ISEPASPSLL  300
TMENLNLRKG EALFVNSILQ LHKYVKESRG YLKEILLSIK RLGPTALTVV EQDTNHNGPF  360
FLGRFLESLH YYSAIFDSLE ASMLRNSQHR MKIERLHFAE EIRNIVAYEG PDRTERHERV  420
DQWRRQLGRA GFQVMPLKCT SQARMMLSVY DCDGYTLSSE KGNLLLGWKG RPVMMASAWQ  480
VPSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3g_A3e-5813647941378Protein SCARECROW
5b3h_A2e-5813647940377Protein SCARECROW
5b3h_D2e-5813647940377Protein SCARECROW
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_44324
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020207048.10.0DELLA protein RGL1
TrEMBLA0A151QVY40.0A0A151QVY4_CAJCA; DELLA protein GAI1
STRINGGLYMA15G28410.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132512730
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.13e-66RGA-like 1