PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_43405
Common NameKK1_043967
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GRAS
Protein Properties Length: 541aa    MW: 60860.9 Da    PI: 4.6427
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_43405genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS1072.6e-331765393374
           GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                    +l+ +c ea+++++++la+ lL+ +s+ asp g++++Rl++y+ +++a++ +         l+ ++      ++  +al+++++ +Pi k++h++a
  C.cajan_43405 176 HLMEACGEALEQDQKALAEVLLKCMSQKASPLGESLERLVFYLSQGMANHGHY--------LKGEAF-----KNFEHALRALYQGTPIGKVAHFAA 258
                    77889*******************************************99877........444444.....4677999***************** PP

           GRAS  99 NqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg......skeeleetgerLakfAeelgvpfefnvlvakrle 187
                     +aI+ea+ ++ + vHi+Df  ++G  Wp +++a+a   ++   l++T ++  +++         + e t+++L + A+++g+++  +    k +e
  C.cajan_43405 259 ISAIVEALPQDcDVVHIVDFCGGHGEEWPIMIEAIAHMHKP---LKLTSIKWGDHDgtkccsIPCNFEDTKRNLYEHAKSCGLKLVVEE---KGVE 348
                    ********9887999*********************98777...******99888788888777899****************997665...7888 PP

           GRAS 188 dleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvksl.sPk....vvvvveqe..adh.nsesFlerflealeyysalfdslea 273
                    +l + e++     gE l+ n+++ l ++   +v ++++  e+L++  +l ++     ++++ +     +  n  +F   f   + +y  l++s+e+
  C.cajan_43405 349 EL-VAEINKTGgrGEFLVFNCMIDLPHMG--RVRSRKHALEFLRVAEDLiNSSgirgMITFGDGGafEKVkNCLNFKSFFDGHVVHYQGLLESIES 441
                    88.7777555467***************9..7777777899**99998733323333578888763212247889********************* PP

           GRAS 274 klpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve.eesgslvlgWkdrp 366
                     +p+   e+r  +E+ +l++ i+++   +  e   ++++  + ++   +  ++  +ls+++ ++++ +l+  + s   r+e e++++l+l  ++ +
  C.cajan_43405 442 HFPSRFsEARLAMEQLFLQPCISSLDWLQMWE---EMKRGCHVEA---KISLEGCRLSKNVLMEIREVLKGSEgSYQTRIEeEHDNELILEYNGTQ 531
                    99987559**************9987777777...3333333344...55677789****************97777888845699********** PP

           GRAS 367 LvsvSaWr 374
                    L+ +SaW+
  C.cajan_43405 532 LLRFSAWK 539
                    *******8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098516.798148517IPR005202Transcription factor GRAS
PfamPF035149.1E-31176539IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    Send to blast
MMRPEDLQSP WLFYGDMNST FDQGVESYGF TMNNHVVDFE PHDFTMTDDH VDDCGLNTLL  60
SSLEDTTSEI CSITFPSSPI FPNDHVQFPI NEETIYLPSL MELDDFDSIL SAQIVSSQSE  120
SVGSFFPSQN LSSSEVENDA WSPNPSVMSE SSSIHTSPLT LPLEHMEIDN QVSLPHLMEA  180
CGEALEQDQK ALAEVLLKCM SQKASPLGES LERLVFYLSQ GMANHGHYLK GEAFKNFEHA  240
LRALYQGTPI GKVAHFAAIS AIVEALPQDC DVVHIVDFCG GHGEEWPIMI EAIAHMHKPL  300
KLTSIKWGDH DGTKCCSIPC NFEDTKRNLY EHAKSCGLKL VVEEKGVEEL VAEINKTGGR  360
GEFLVFNCMI DLPHMGRVRS RKHALEFLRV AEDLINSSGI RGMITFGDGG AFEKVKNCLN  420
FKSFFDGHVV HYQGLLESIE SHFPSRFSEA RLAMEQLFLQ PCISSLDWLQ MWEEMKRGCH  480
VEAKISLEGC RLSKNVLMEI REVLKGSEGS YQTRIEEEHD NELILEYNGT QLLRFSAWKK  540
N
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_43405
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020206599.10.0nodulation-signaling pathway 2 protein
TrEMBLA0A151QXR00.0A0A151QXR0_CAJCA; Nodulation-signaling pathway 2 protein
STRINGGLYMA18G43580.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42742761
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.14e-14RGA-like 1