PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_43043
Common NameKK1_046573
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family HB-other
Protein Properties Length: 279aa    MW: 31695.6 Da    PI: 6.7966
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_43043genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox628.9e-202075257
                   T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
       Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                   +kR   t+ ql +Le+++++++yp++e++ eLA++lgLte+q++ WF+ rR k+k+
  C.cajan_43043 20 KKRKLKTPAQLLALEKFYNEKKYPTEEMKSELADELGLTEKQISGWFCHRRLKDKR 75
                   89****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.1E-22275IPR009057Homeodomain-like
PROSITE profilePS5007117.5721676IPR001356Homeobox domain
SuperFamilySSF466891.03E-181884IPR009057Homeodomain-like
SMARTSM003895.3E-211880IPR001356Homeobox domain
CDDcd000863.64E-192077No hitNo description
PfamPF000463.1E-172075IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MEESSELQSE ENKVSNEKNK KRKLKTPAQL LALEKFYNEK KYPTEEMKSE LADELGLTEK  60
QISGWFCHRR LKDKRMMKDE AVANGRQDRS SGVIQDRGSG LGQDSCGSSK HADYRYLDPK  120
EVESHGLYNH EFSVADMTHG RRSRYPENVS GVDETSSESS SYLQERLFSQ GQDPYDMEHS  180
RHLTPNGALP PLNPKGALNM GYKPSGYLKV KGEIEHAAIT AVKKQLGRHY LEDGPVLGIE  240
FDTLPPGAFE CQTADPANGR LHHILFFHFF FKCLIQLVW
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_43043
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150360.0AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020208191.10.0homeobox-DDT domain protein RLT1
TrEMBLA0A151QQX10.0A0A151QQX1_CAJCA; Homeobox protein NANOG
STRINGGLYMA14G03850.11e-166(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57923051
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03250.14e-72HB-other family protein