PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_42796
Common NameKK1_042063
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 499aa    MW: 56133.4 Da    PI: 8.8771
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_42796genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.00036444466123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ++Cp+C+k F++   L  H r+H
  C.cajan_42796 444 HECPICNKIFRSGQALGGHKRSH 466
                    79******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.93E-5534No hitNo description
Gene3DG3DSA:3.30.160.601.3E-4631IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015710.097936IPR007087Zinc finger, C2H2
PfamPF139121.6E-6932IPR007087Zinc finger, C2H2
SMARTSM003550.14931IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002801131IPR007087Zinc finger, C2H2
SMARTSM003550.2192114IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.47392119IPR007087Zinc finger, C2H2
SuperFamilySSF576673.4E-893114No hitNo description
PROSITE patternPS00028094114IPR007087Zinc finger, C2H2
PfamPF139125.2E-794116IPR007087Zinc finger, C2H2
SuperFamilySSF576673.4E-8439466No hitNo description
PfamPF139122.2E-11443466IPR007087Zinc finger, C2H2
SMARTSM003550.018444466IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.702444466IPR007087Zinc finger, C2H2
PROSITE patternPS000280446466IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    Send to blast
MMSYEERKFV CKYCSKRFPC GKSLGGHIRT HMMSEHSHSH SRSVQGNEKK NNVGGAMFSN  60
NNIIYGLREN PKKTTRFVHS NATLQQQQQL DKFCKECGKG FPSLKALCGH MACHSEKDKN  120
RFEGFTEKQK LVMDSQSDTE TSAPRRSRRM RFKTLSNSNN NNNQSQSSSV SEVEQEQEEV  180
ARCLMMLYKD SCHKGRFALV TESSDNNSVV LEAKSSSLET KVTMMMNSTG NGKNSMSSAY  240
EFVEEKKKLE LEVDHKYKHE DMKFKSAEIC YDSDNSDSGY FRYGPKKVDS DDSNDGFFRN  300
EVKSSKVGYL SGFEEYDVES RKVLSRGRSR STEFKKFALE DWENDGEDVA AARKFGSKKF  360
KKSNYDQNLG GVSSRKMGNG YTNGGNNKYE CLTSERDNGS DDSAYESDES STDTDSYPAP  420
KAHNRNISGQ KGKKKLKTKK SKAHECPICN KIFRSGQALG GHKRSHFVGG SEENALVIRP  480
GAPNVPCLID LNLPAPVDE
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_42796
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020205317.10.0uncharacterized protein LOC109790543
TrEMBLA0A151R2M30.0A0A151R2M3_CAJCA; Uncharacterized protein
STRINGXP_007157592.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF11013080
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.11e-55C2H2-like zinc finger protein