PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_41044
Common NameKK1_042137
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 349aa    MW: 39247.9 Da    PI: 7.4524
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_41044genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.71.1e-49171431128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                    + pGfrF Ptdeel+++yL+kk++g++ ++ +vi+ev+++k+ePwdLp k++ ++++ew+fFs+r +ky++g++++rat+ gyWkatgk+++v+s 
  C.cajan_41044  17 MFPGFRFCPTDEELISYYLRKKLDGHEDSV-QVIPEVELCKYEPWDLPaKSFIQSDNEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKS- 110
                    579************************999.99***************667777899**************************************. PP

            NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    +++++g+k+tLvf+ grapkge+t+W+mhey +
  C.cajan_41044 111 GSNVIGTKRTLVFHLGRAPKGERTEWIMHEYCI 143
                    99*****************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-569158IPR003441NAC domain
PROSITE profilePS5100553.85917159IPR003441NAC domain
PfamPF023653.8E-2619142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0009938Biological Processnegative regulation of gibberellic acid mediated signaling pathway
GO:0033619Biological Processmembrane protein proteolysis
GO:0048573Biological Processphotoperiodism, flowering
GO:0071472Biological Processcellular response to salt stress
GO:0005634Cellular Componentnucleus
GO:0005886Cellular Componentplasma membrane
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MEGVSREAQM SIAASSMFPG FRFCPTDEEL ISYYLRKKLD GHEDSVQVIP EVELCKYEPW  60
DLPAKSFIQS DNEWFFFSPR GRKYPNGSQS KRATECGYWK ATGKERNVKS GSNVIGTKRT  120
LVFHLGRAPK GERTEWIMHE YCINDKSQDS LVICRLKRNT DFRLNDASNR ASSSQRHPVN  180
SHESGCAVSE GGTDQRGVCE QDKEVGCSSK RSSSSYGSMD QIDSVSESNP RPANEATLTE  240
SSNQPKEAYE EDCYAEILKD DIIKLDESSI SEEGHTRAQD PAQVHPAQGT AQRRIRLRIG  300
NSKHSPAVVR FPSTIHSSKS ALANRLAMFA FFIFTLIVLY FWSLLCGLK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-451615816164NO APICAL MERISTEM PROTEIN
1ut4_B4e-451615816164NO APICAL MERISTEM PROTEIN
1ut7_A4e-451615816164NO APICAL MERISTEM PROTEIN
1ut7_B4e-451615816164NO APICAL MERISTEM PROTEIN
3swm_A4e-451615819167NAC domain-containing protein 19
3swm_B4e-451615819167NAC domain-containing protein 19
3swm_C4e-451615819167NAC domain-containing protein 19
3swm_D4e-451615819167NAC domain-containing protein 19
3swp_A4e-451615819167NAC domain-containing protein 19
3swp_B4e-451615819167NAC domain-containing protein 19
3swp_C4e-451615819167NAC domain-containing protein 19
3swp_D4e-451615819167NAC domain-containing protein 19
4dul_A4e-451615816164NAC domain-containing protein 19
4dul_B4e-451615816164NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00280DAPTransfer from AT2G27300Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_41044
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029125522.10.0NAC domain-containing protein 40
TrEMBLA0A151R2J50.0A0A151R2J5_CAJCA; NAC domain-containing protein 74
STRINGGLYMA13G39090.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF73153346
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27300.11e-101NTM1-like 8