PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_41013
Common NameKK1_041550
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 480aa    MW: 52486 Da    PI: 6.2653
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_41013genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.70.00163253223
                   EETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                   +C +Cgk Fs+   L  H r+H
  C.cajan_41013 32 ECDICGKIFSSGKALGGHRRSH 53
                   5*******************99 PP
2zf-C2H216.32.7e-0595115323
                    ETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                    C +C+k F++k  L  H+r+H
  C.cajan_41013  95 CCICKKEFPTKNALFGHMRSH 115
                    ********************9 PP
3zf-C2H212.10.00062387409123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ykC+ Cgk+Fs+   L  H ++H
  C.cajan_41013 387 YKCGACGKVFSTFQGLGGHRSVH 409
                    9***********99998888877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139121.9E-93153IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.4923158IPR007087Zinc finger, C2H2
SMARTSM003550.583153IPR015880Zinc finger, C2H2-like
SuperFamilySSF576671.21E-83253No hitNo description
PROSITE patternPS0002803353IPR007087Zinc finger, C2H2
SuperFamilySSF576671.21E-888115No hitNo description
SMARTSM003550.01593115IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.5893115IPR007087Zinc finger, C2H2
PROSITE patternPS00028095115IPR007087Zinc finger, C2H2
PfamPF139124.3E-695117IPR007087Zinc finger, C2H2
SuperFamilySSF576672.63E-5386413No hitNo description
PfamPF139125.3E-6387411IPR007087Zinc finger, C2H2
PROSITE profilePS5015711.115387414IPR007087Zinc finger, C2H2
SMARTSM003550.26387409IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280389409IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MKRSHIGCSK AEAEPMTDEA IAVKIASPTM RECDICGKIF SSGKALGGHR RSHFQKHQKK  60
VKVRFTNPSK AGDSSNTRAN CDDDDDDTND DKNICCICKK EFPTKNALFG HMRSHPERSW  120
RGVSPPTHNK HSSSSSPSYS YSSHNSDSME KTMKDHDYDD GDGNGDGDDC VGGGNTLIAP  180
DEHDHTEAID LSSFILSTWQ KKDKRGRKCI GGIEAAETLV YLCTHARYFS ADHESNRVNV  240
APKEDVLPKS APPLTKHDKR KVDESSSSKK AEVKRIKLLL KVGNRSDGAG ACGDDGGGKL  300
NRCEGLSESG VERMVDDDVD EALDDVMNDA EVTPVTVTTR VQDHDERNNN KVKKVEKGKS  360
GKKLVLKSKG KDHEYENVGS QEKVGGYKCG ACGKVFSTFQ GLGGHRSVHK EKNIVPIIDE  420
PNQPDDAVVA EENNSSTSSN VHKMDEALLK EETIAADEAG QSSGTKTLDF DLNEPYVMED
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_41013
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020204939.10.0uncharacterized protein LOC109790235
TrEMBLA0A151R3Z10.0A0A151R3Z1_CAJCA; Zinc finger protein 1
STRINGGLYMA13G04041.11e-147(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15181913
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56200.14e-09C2H2 family protein