PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_40858
Common NameKK1_041439
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GRAS
Protein Properties Length: 540aa    MW: 61352.3 Da    PI: 4.5199
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_40858genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS111.11.4e-341755383374
           GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                    +l+ +c ea+++++++la+ +L+ +s+ asp g++++Rla+y+ +++a++           l+ ++      ++   al+++++  Pi k++h++a
  C.cajan_40858 175 HLMEACGEALEQDQKALAEVILKCMSQKASPLGESLERLAFYLSQGIANHGDY--------LKGEAF-----KNFKPALTALYQGNPIGKVAHFAA 257
                    77889*****************************************9998766........444444.....355567778*************** PP

           GRAS  99 NqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg......skeeleetgerLakfAeelgvpfefnvlvakrle 187
                     +aI+ea  ++ + vHi+Df i++G  Wp +++a+a       +l++T ++  +++         + eet+++L + A++ gv++  +    k +e
  C.cajan_40858 258 ISAIVEAWPQDcDVVHIVDFCIGHGEEWPIMIEAIAHM---HKTLKLTSIKLVDHDgieycsTPCNFEETRRQLYEHAKTYGVKLVVEE---KGVE 347
                    *******98887999*********************96...557*******9888899998778899*****************97665...7888 PP

           GRAS 188 dleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvksl.....sPkvvvvveqe..adh.nsesFlerflealeyysalfdslea 273
                    +l + e++ +   gE l+ n+++ l ++   ++ ++ +  e+L++  +l     +  ++++ +     +  n  +F   f   l +y al++s+e+
  C.cajan_40858 348 EL-VAEINKRGrrGEFLVFNCMIDLPHMG--RLRSRRHALEFLRVAEDLinssgNRGMITFGDGGafEKVkNCLNFKSFFDGHLVHYQALLESVES 440
                    88.7777444345***************8..55555567899998887744333345788888763212247889********************* PP

           GRAS 274 klpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee.sgslvlgWkdrp 366
                     +p++  e+r ++E+ +l++ i+++   ++ e  +r  +    ++   +  ++  +l++++ ++++ +lr  + s   r+eee +++lvl  k+ +
  C.cajan_40858 441 HFPSHFlEARLTMEQLFLQPCISSLDWLQTWEEMKRDCH---VEA---KISLEGCRLGKNVLMEIREVLRGSEgSYQTRIEEEyDNELVLEYKGTQ 530
                    ***9999***************99888888874444443...334...55677799*****************777788986669*********** PP

           GRAS 367 LvsvSaWr 374
                    L+ +S W+
  C.cajan_40858 531 LLRFSTWK 538
                    *******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098518.811147516IPR005202Transcription factor GRAS
PfamPF035145.0E-32175538IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 540 aa     Download sequence    Send to blast
MMQPEDQQSP WLFYEEMNST FDQGVELYGF TMNNHVDFEP YGFTMMDDHV DDCGLNTLLS  60
SLEDTTSEIC SITFPSSHIF PNDHVQFPIN EETLYLPTLM ELDDFDSILS AQIVSSQGES  120
EGSFFPSQNL SSSEVENDAW SPALSVNSES SSIHTPPLTL PQEHMEIDNQ VSLPHLMEAC  180
GEALEQDQKA LAEVILKCMS QKASPLGESL ERLAFYLSQG IANHGDYLKG EAFKNFKPAL  240
TALYQGNPIG KVAHFAAISA IVEAWPQDCD VVHIVDFCIG HGEEWPIMIE AIAHMHKTLK  300
LTSIKLVDHD GIEYCSTPCN FEETRRQLYE HAKTYGVKLV VEEKGVEELV AEINKRGRRG  360
EFLVFNCMID LPHMGRLRSR RHALEFLRVA EDLINSSGNR GMITFGDGGA FEKVKNCLNF  420
KSFFDGHLVH YQALLESVES HFPSHFLEAR LTMEQLFLQP CISSLDWLQT WEEMKRDCHV  480
EAKISLEGCR LGKNVLMEIR EVLRGSEGSY QTRIEEEYDN ELVLEYKGTQ LLRFSTWKKN
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_40858
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020204878.10.0nodulation-signaling pathway 2 protein
TrEMBLA0A151R4C60.0A0A151R4C6_CAJCA; Nodulation-signaling pathway 2 protein
STRINGGLYMA18G43580.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42742761
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.18e-14RGA-like 1