PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_40070 | ||||||||
Common Name | KK1_039199 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | ERF | ||||||||
Protein Properties | Length: 223aa MW: 24292.9 Da PI: 5.3228 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58 | 2.4e-18 | 51 | 101 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a++ ++g C.cajan_40070 51 SVYRGVRMRT-WGKWVSEIREPRK---KNRIWLGTFATAEMAARAHDVAALTIKG 101 78*****998.**********854...59*********************99876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.21E-31 | 51 | 111 | No hit | No description |
SuperFamily | SSF54171 | 9.81E-22 | 51 | 110 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 2.3E-12 | 51 | 101 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.1E-32 | 52 | 110 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.1E-36 | 52 | 115 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.051 | 52 | 109 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.8E-10 | 53 | 64 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.8E-10 | 75 | 91 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence Send to blast |
MVEPPSPQSE TSTNTNSTSA SSPSSSSSNS KKRGRDSNND NNNNNNNNKH SVYRGVRMRT 60 WGKWVSEIRE PRKKNRIWLG TFATAEMAAR AHDVAALTIK GSSAILNFPE LAASLPRPAS 120 NAPRDVQAAA AKAASMVAAP PRTPPSPVAT PEEELGEIVE LPALGTSFDS AEPSPEFVFV 180 EPDDAWPYSQ PWYHSIYDGG YFIGDMNMVS MHESENMVLS LWP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 1e-19 | 40 | 109 | 2 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_40070 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020203033.1 | 1e-162 | ethylene-responsive transcription factor TINY | ||||
Swissprot | Q9LYD3 | 7e-57 | DREB3_ARATH; Dehydration-responsive element-binding protein 3 | ||||
TrEMBL | A0A151RAH0 | 1e-160 | A0A151RAH0_CAJCA; Dehydration-responsive element-binding protein 3 | ||||
STRING | GLYMA09G32730.2 | 1e-100 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF192 | 34 | 263 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 3e-51 | ERF family protein |
Publications ? help Back to Top | |||
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