PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_39856 | ||||||||
Common Name | KK1_037451 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | G2-like | ||||||||
Protein Properties | Length: 414aa MW: 46064.8 Da PI: 7.9016 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 102.1 | 3.6e-32 | 233 | 286 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ C.cajan_39856 233 PRMRWTSSLHNRFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 286 9****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.15E-15 | 230 | 287 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 7.0E-29 | 231 | 287 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 6.4E-24 | 233 | 286 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 3.0E-7 | 234 | 285 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 414 aa Download sequence Send to blast |
MPQNPIPDLS LHISLPNSAP SSIFTQGDSD SLFDIWPQQG DDAEGLKSHS DGSIKGSPHT 60 DTQLSLANPT STTRSEAEST WRKRNFVRVL HGVSEAEKLR LINGISLYSN LPSLDNSTSL 120 TIPSIERINS TNKLSSLYAV PHPPYSSNSA PNYNNNGIIG GVAVEQISRF HEIALENLGP 180 QQFQYFGYPH HQQYQQHQFG NSNNIGASSD FSNGFVKSRM LPRQQSKRNM RAPRMRWTSS 240 LHNRFVHAVE LLGGHERATP KSVLELMDVK DLTLAHVKSH LQMYRTVKNT DKPAASSDGD 300 EDFISLTVPN NQNKNFFPNQ RGPPNASIDN DMGYTCSNLW VNSSSSRGAR IQANSRDLNE 360 LSPQGILSSQ HSGKLSEGSN YIQARSFKDQ KLECQNPSLE FTLGRSNWHN NEHT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-17 | 234 | 288 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-17 | 234 | 288 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 2e-17 | 234 | 288 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 2e-17 | 234 | 288 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 2e-17 | 234 | 288 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 2e-17 | 234 | 288 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-17 | 234 | 288 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-17 | 234 | 288 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-17 | 234 | 288 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-17 | 234 | 288 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-17 | 234 | 288 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-17 | 234 | 288 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_39856 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020240418.1 | 0.0 | transcription repressor KAN1 isoform X1 | ||||
TrEMBL | A0A151RF88 | 0.0 | A0A151RF88_CAJCA; Putative Myb family transcription factor At1g14600 family | ||||
STRING | GLYMA07G12070.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1756 | 33 | 91 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16560.1 | 1e-51 | G2-like family protein |