PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_39557
Common NameKK1_043892
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 547aa    MW: 59098.6 Da    PI: 7.6823
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_39557genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.84e-32192249260
                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                    dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk  ers+ d++++ei+Y+g+H+h+k
  C.cajan_39557 192 DDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIVYKGTHDHPK 249
                    8****************************************.***************85 PP
2WRKY106.31.5e-33368426159
                    ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                    ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
  C.cajan_39557 368 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 426
                    59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-27186250IPR003657WRKY domain
PROSITE profilePS5081123.996186250IPR003657WRKY domain
SuperFamilySSF1182902.62E-25188250IPR003657WRKY domain
SMARTSM007742.3E-34191249IPR003657WRKY domain
PfamPF031067.2E-25192248IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.1E-37353428IPR003657WRKY domain
SuperFamilySSF1182901.96E-29360428IPR003657WRKY domain
PROSITE profilePS5081138.825363428IPR003657WRKY domain
SMARTSM007743.1E-39368427IPR003657WRKY domain
PfamPF031063.2E-26369426IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    Send to blast
MSPAKLPISR SPCITVPPGL SPTSFLESPV LLSNMKVEPS PTTGSLRKLQ QTLHGSMASA  60
ASATFPVTTA CFNTNTVDDR KSSFFEFKPL NRSNMVPADF NNHVSKQSNQ VEGPGKAQSF  120
ASSPFVESEI AVPSNELSLS SPVQMVSSGA STPVDVDLDD INHKGNAATG LQASHAEVRG  180
SGLSVAAEKT SDDGYNWRKY GQKLVKGSEF PRSYYKCTHP NCEVKKLFER SHDGQITEIV  240
YKGTHDHPKP QPSCRYSAGT VMSIQGGERS DKASSLAGRD DKASTMYGQV SHGAEPNSTP  300
ESSPVATNGD GLEGAGLVSS RINEEVDDDD PFSKRRKMEL GNADITPVVK PIREPRVVVQ  360
TLSEVDILDD GYRWRKYGQK VVRGNPNPRS YYKCTNAGCP VRKHVERASH DPKAVITTYE  420
GKHNHDVPAA RNSSHDMAAP ATAGGQARIK LEESDTISLD LGMGINSAAE HRSHGQGKTL  480
HSEFGDPQTH TTNSNFKFVH TTQAPVYFGV LNNSSNPYGS RDNRSDGPLN HSTYPCPQSM  540
GRILMGP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-37192429878Probable WRKY transcription factor 4
2lex_A2e-37192429878Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_39557
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU3753500.0EU375350.1 Glycine max transcription factor (WRKY3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020206544.10.0probable WRKY transcription factor 20 isoform X1
SwissprotQ93WV01e-179WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLA0A151QXW80.0A0A151QXW8_CAJCA; Putative WRKY transcription factor 20
STRINGGLYMA02G46690.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39463463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.20.0WRKY family protein