PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_39394
Common NameKK1_036448
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family B3
Protein Properties Length: 399aa    MW: 45253 Da    PI: 8.2778
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_39394genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B365.39e-2135125199
                    EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
             B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                    f+k l++s+v +  ++ lp +f+++h  +  +++t++ledesg++++ k+i +k++    l++GW++F   ++L+egD+vvF+l++ ++f  +v +
  C.cajan_39394  35 FVKSLVRSHVASCFWMGLPVSFCKKHLPD--KDTTIILEDESGKEYNTKYIACKTG----LSAGWRQFSAVHKLQEGDVVVFQLIQPTKF--KVYI 122
                    89************************534..5679***************777776....*************************97777..9998 PP

                    E-S CS
             B3  97 frk 99 
                    +r+
  C.cajan_39394 123 IRA 125
                    886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.107.9E-2427126IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.16E-2528126IPR015300DNA-binding pseudobarrel domain
CDDcd100176.95E-2833124No hitNo description
PfamPF023624.6E-1835125IPR003340B3 DNA binding domain
SMARTSM010195.4E-2635126IPR003340B3 DNA binding domain
PROSITE profilePS5086313.6235126IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
KAATEGTSSR GEVMSSAVLQ AEEIQSNLQS EFPSFVKSLV RSHVASCFWM GLPVSFCKKH  60
LPDKDTTIIL EDESGKEYNT KYIACKTGLS AGWRQFSAVH KLQEGDVVVF QLIQPTKFKV  120
YIIRANNTRE LDGAFLSLDN CIKQKMGGKT CKGNTDIDVV TCNASKRKHG KSIPLDVRKK  180
KKSSMSRMRP KARPPVEQSE NDSDEALSEV MEGYKMLEFK DVKGFENFSI IVDGMPIDVE  240
LSTEVRNKYY NLCCSQHAFL HDNLIKGMNY KLIAGIISET VNIADAIKVS VICTPRFEFT  300
NWDKTLLAFE HLGMNVEFLR VRLRRLVSIA YETNDALEAR KYLACRNEYT RADDEIKNME  360
AKLEELKGAC YEFGAYLESL KCKAESYHVK FKKEVATPW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1165181KRKHGKSIPLDVRKKKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_39394
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029124718.10.0B3 domain-containing protein Os01g0234100
TrEMBLA0A151RI600.0A0A151RI60_CAJCA; B3 domain-containing protein Os01g0234100 family (Fragment)
STRINGXP_007155931.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF10073398
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-36B3 family protein