PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_39372 | ||||||||
Common Name | KK1_035219 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | MYB_related | ||||||||
Protein Properties | Length: 163aa MW: 17818.2 Da PI: 10.4812 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 39.3 | 1.5e-12 | 2 | 35 | 12 | 47 |
HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +v+a +++G++ W+tIar ++ gRt++ +k++w++ C.cajan_39372 2 IVKAQARFGNR-WATIARFLN-GRTDNAIKNHWNST 35 799********.*********.***********986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 20.578 | 1 | 40 | IPR017930 | Myb domain |
SMART | SM00717 | 0.0026 | 1 | 38 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 3.53E-8 | 1 | 36 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 3.1E-13 | 1 | 37 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 2.3E-9 | 2 | 35 | IPR001005 | SANT/Myb domain |
SuperFamily | SSF46689 | 8.58E-10 | 2 | 41 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence Send to blast |
MIVKAQARFG NRWATIARFL NGRTDNAIKN HWNSTLKRKC SQSQAFSNSH PHPLKRHATT 60 ASASASASAT PSGSDFSAPA QLAETASTDP ATLLTLSLPG SDSCEKQLFS AKLLNVMQEM 120 IRVEVRSYMS GLERMQTQAI QNALVDKLLN ANRIDKCELQ NGK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_39372 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020238661.1 | 1e-117 | transcription factor MYB73 | ||||
Swissprot | O23160 | 7e-30 | MYB73_ARATH; Transcription factor MYB73 | ||||
TrEMBL | A0A151RLB2 | 1e-117 | A0A151RLB2_CAJCA; Transcription factor MYB44 | ||||
STRING | GLYMA04G04490.1 | 2e-49 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 7e-26 | myb domain protein 73 |
Publications ? help Back to Top | |||
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