PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_36768
Common NameKK1_041221
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 159aa    MW: 18412.2 Da    PI: 5.0993
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_36768genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.73.6e-3198155158
                    ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                    ldDg++WrKYG+K+vk+s++pr+YY+C+  gCpvkk+ver+++dp++v +tYeg H+h
  C.cajan_36768  98 LDDGFKWRKYGKKMVKNSPNPRNYYKCSVDGCPVKKRVERDKDDPSYVLTTYEGIHTH 155
                    59******************************************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-3285155IPR003657WRKY domain
SuperFamilySSF1182901.11E-2791155IPR003657WRKY domain
PROSITE profilePS5081128.48393155IPR003657WRKY domain
SMARTSM007743.7E-3698157IPR003657WRKY domain
PfamPF031068.7E-2599155IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009867Biological Processjasmonic acid mediated signaling pathway
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MTDKNLRPPD SSDSGFTNQW PLEVSEYFYF DDDDDPTDSF VFGHVLSQDN QANEVGDFKG  60
TRASHFEGFS SREVGNEHEK KEVNDRVAFK TKSEVEILDD GFKWRKYGKK MVKNSPNPRN  120
YYKCSVDGCP VKKRVERDKD DPSYVLTTYE GIHTHLSYC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A8e-2588155774Probable WRKY transcription factor 4
2lex_A8e-2588155774Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00531DAPTransfer from AT5G26170Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_36768
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150356e-43AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020204712.11e-116probable WRKY transcription factor 50
TrEMBLA0A151R5041e-115A0A151R504_CAJCA; Putative WRKY transcription factor 50
STRINGGLYMA04G05700.19e-79(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF112034110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.17e-45WRKY DNA-binding protein 50