PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_34152
Common NameKK1_035585
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family HD-ZIP
Protein Properties Length: 311aa    MW: 35705.6 Da    PI: 4.4677
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_34152genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.98.4e-1983136356
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
       Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                    k++++t+eq++ Le+ Fe ++++  e++ +LAk+lg++ rqV +WFqNrRa+ k
  C.cajan_34152  83 KKRRLTSEQVQFLESNFEAENKLEPERKVQLAKELGMQPRQVAIWFQNRRARFK 136
                    56689***********************************************98 PP
2HD-ZIP_I/II130.56.6e-4283174293
    HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                    kkrrl++eqv++LE++Fe+e+kLeperKv+la+eLg+qprqva+WFqnrRAR+ktkq+Ekdy +Lk++yd lk++ ++L +e+++L+ee+++
  C.cajan_34152  83 KKRRLTSEQVQFLESNFEAENKLEPERKVQLAKELGMQPRQVAIWFQNRRARFKTKQIEKDYGTLKASYDMLKRDYDNLLQENDKLKEEVNS 174
                    9***************************************************************************************9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.68E-1972140IPR009057Homeodomain-like
PROSITE profilePS5007116.95778138IPR001356Homeobox domain
SMARTSM003892.0E-1780142IPR001356Homeobox domain
CDDcd000863.60E-1681139No hitNo description
PfamPF000462.7E-1683136IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.1E-1985144IPR009057Homeodomain-like
PRINTSPR000319.7E-6109118IPR000047Helix-turn-helix motif
PROSITE patternPS000270113136IPR017970Homeobox, conserved site
PRINTSPR000319.7E-6118134IPR000047Helix-turn-helix motif
PfamPF021833.0E-17138179IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MAGEKFHGGS SMTLKLQKER LSCSSEMIQS FWVQNQNSEP SFHGSKPMAN VVNVMDWPFF  60
RGLEKEENGD DEDFDACFHQ PGKKRRLTSE QVQFLESNFE AENKLEPERK VQLAKELGMQ  120
PRQVAIWFQN RRARFKTKQI EKDYGTLKAS YDMLKRDYDN LLQENDKLKE EVNSLKSRLI  180
PGEKEEQNLD DTCCDAVNSQ HKEEMNLIVN TGSENGSKVT LPVMAISKQE DANSAKSDVL  240
DSDSPHFTDG NQSSFVEPAD SSQDEEDILS QNILTMPFLP KVEDVCYDEP RDNSCSFRFP  300
AEDQTFCFWS F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130138RRARFKTKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_34152
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150341e-118AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020238972.10.0homeobox-leucine zipper protein HAT5 isoform X1
RefseqXP_020238973.10.0homeobox-leucine zipper protein HAT5 isoform X1
TrEMBLA0A151RKE80.0A0A151RKE8_CAJCA; Homeobox-leucine zipper protein HAT5
STRINGGLYMA08G40705.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15003499
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.13e-43homeobox 1