PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_33645

Common Name

Dof7, KK1_035165

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

Dof

Protein Properties

Length: 328aa MW: 35082.9 Da PI: 8.6539

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_33645	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.1	4.6e-39	60	118	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+ C.cajan_33645 60 ENQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKN 118 57899****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-25	60	117	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.2E-32	62	118	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.544	64	118	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	66	102	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence Send to blast
MIQELLGGAG LIAGERKPSI NGGGGGVHLS TTPPPSSTAN NVTLTSTTTT TTTTTTTSSE 60 NQNLRCPRCD SSNTKFCYYN NYNLTQPRHF CKTCRRYWTK GGALRNVPIG GGCRKNKNIG 120 VSNSVAKTAS TKMKTVASEL GKSPGFGGFE VEHEIPPPSQ ILWGSPQNTH LLALLRATHN 180 PNPNPNPSPM SVKEEGNLMG HMVSTEPLVS NALLNHRTLG YDAVAQVPSL GLFGRNNQDH 240 GGFLHGEHHN SGIQELYQKL RSSSVNNYCS DNSSQVFMGN MASNYSSSLS NNILETTSVA 300 GGEFGYWNNG PTFSWSDLPT TNGAGAYP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_33645

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KP662911	0.0	KP662911.1 Cajanus cajan Dof7 (Dof7) gene, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020238611.1	0.0	dof zinc finger protein DOF1.1
TrEMBL	A0A0K8K5W4	0.0	A0A0K8K5W4_CAJCA; Dof protein
STRING	XP_007155971.1	1e-171	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7219	32	47

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	2e-34	DOF zinc finger protein 1

Publications ? help Back to Top
Malviya N, et al. Genome wide in silico characterization of Dof gene families of pigeonpea (Cajanus cajan (L) Millsp.). Mol. Biol. Rep., 2015. 42(2): p. 535-52 [PMID:25344821]