PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_32945
Common NameKK1_034456
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 445aa    MW: 51097.3 Da    PI: 6.5177
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_32945genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.21e-09391439247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                      ++W++ E e l+ av ++G+g+Wk I +      + Rt+ ++k++w++ 
    C.cajan_32945 391 KKWSPLEMETLKTAVDKFGKGNWKIILNSHKdifEERTEVDLKDKWRNM 439
                      58********************************9************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.7385444IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.8E-11387441IPR009057Homeodomain-like
SMARTSM007173.3E-5389442IPR001005SANT/Myb domain
PfamPF002497.5E-8391439IPR001005SANT/Myb domain
CDDcd116604.41E-17391441No hitNo description
SuperFamilySSF466894.06E-13392443IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009901Biological Processanther dehiscence
GO:0010152Biological Processpollen maturation
GO:0043067Biological Processregulation of programmed cell death
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MESDAVRRWA LEFLLRSPFV ADDLIEKVLP IIPVSDADSR LKKTLLLRAL QYHVFALSIP  60
EPLLQILEIL EEFHRIDGSP VTAAMSAAYC AVAVECTLKY LQLEDHGKNP FYFNAVERIW  120
RARVPHMNRS GDFEGSLMFT EELKRWSSDI EASLSDSQLR ERLASIDTRR DAIIKLRVYL  180
AEEWANLGPS FLEVAASVHT NKAPTTEHLE AQHQHQERGR FLKIIMLPNQ YGHHGFHLYM  240
PFLHYLYNAA DEQIPLATTI EVQKVGECAS SGLQTLVKDS LLNSSEVNEE AHVEEQSRDA  300
DIPCPDVINN NEADMAEKDQ APVPHIRVQK PSLMEENTAA RIYEWDESID GMQGGTSNPE  360
RRFHLPSPKV RKLSPLKKYV PTKITMRRRA KKWSPLEMET LKTAVDKFGK GNWKIILNSH  420
KDIFEERTEV DLKDKWRNMT RYGSK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_32945
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020237988.10.0uncharacterized protein LOC109817184 isoform X2
TrEMBLA0A151RNF30.0A0A151RNF3_CAJCA; Uncharacterized protein
STRINGXP_007136185.11e-174(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28243260
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58340.26e-25MYB_related family protein