PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_32723
Common NameKK1_034998
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 313aa    MW: 34889.9 Da    PI: 7.7354
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_32723genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.000235375123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   y+C+ C + F++   L  H+++H
  C.cajan_32723 53 YSCSFCRREFRSAQALGGHMNVH 75
                   99*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.58E-65079No hitNo description
PROSITE profilePS5015711.2195380IPR007087Zinc finger, C2H2
SMARTSM003550.00985375IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002805575IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MEQGQCWTKR KYSLSSNLTS PTNPSYGDSW EEQAFAEDAA NSLGGCIWPP RSYSCSFCRR  60
EFRSAQALGG HMNVHRRDRA RLKQQPSSPH NEILCHDLET QLHKPVQSPF ASFGGFLYPS  120
PVCGLAHEKT NPNSDLDFVA SPSSSPSPSK ALLAPSVNGS SCREETMIPL YDSSILHKIS  180
PVHNSSESWP NLAEDHRLYS CKFHPQADTK KPSKGIMDSR CRGNKKGNDD SDGAMSWNSV  240
VCRTHTSSQF ESTEEADHII SCKKRKTDAS STLFPPKSSS VDRHHMQPKM FELNPSSMEE  300
LDLELRLGNR SKV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1njq_A2e-124875229superman protein
2l1o_A2e-124875229Transcriptional regulator SUPERMAN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_32723
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020238447.10.0zinc finger protein 10
TrEMBLA0A151RLX90.0A0A151RLX9_CAJCA; Putative transcriptional regulator RABBIT EARS
STRINGGLYMA01G24820.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17763078
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.12e-26zinc-finger protein 10