PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_32689
Common NameKK1_033584
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 596aa    MW: 67128.7 Da    PI: 9.9258
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_32689genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.47e-08504553147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                      r +++  E e lv+av++lG+g+W+ + ++     k+Rt  ++k++w ++
    C.cajan_32689 504 RRPFSVLEVEALVQAVEKLGTGRWRDVKQRAFdnaKHRTYVDLKDKWKTL 553
                      567888999**********************99**************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF542362.16E-8309402IPR029071Ubiquitin-related domain
Gene3DG3DSA:3.10.20.907.0E-4311383No hitNo description
PROSITE profilePS500538.938314382IPR000626Ubiquitin domain
CDDcd017690.00388318385No hitNo description
PROSITE profilePS5129414.674499558IPR017930Myb domain
SMARTSM007171.4E-7503556IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.6E-10504554IPR009057Homeodomain-like
CDDcd116602.08E-16505555No hitNo description
SuperFamilySSF466891.28E-15505586IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 596 aa     Download sequence    Send to blast
MVLQKRLNYG FNGYQVPVIP RASRSARGRG TIKKKPGSSQ IQAFEILASV AGNFLQENGN  60
SSYDNVAPTK DPHVFANNNI KDKNKDKEES FKGDLFEHGS CSEITSTCIP SMQGKHDNHR  120
VMGDSSFFGN HLEGQGQNVL EREDEKVKGR SVSGLIELDQ KVSTDPISEN NVEKKPLLNG  180
RRLLDSFPNG STARKLVNRD DDENFVRCTQ LKSKNKISVT QPDTPKLKDA IPFMSDKNCH  240
SRDNSELENL QKMYPFKKRK FFNQTSSSTS DRGSQCQGMY DSSDTKVNGM NHVNEESSSV  300
FGHQVHSGSR GRNVKLSIKS FKVPELFIDM PETATIGSLK RTVMEAVTTI LGDELRVGIF  360
FQGKKVRDDN KTLIQTGISQ DDKRHRLGFM LEPRHTPTSP SSYNDDSCFL TTSSQQKLSR  420
QSTSLMSQQG TYNVSQERSM IKIENCVEGD LNLISSVEEN TLANNNMSKC RALVAVPAIN  480
MEALAVVPFR RKSGNPDFAQ RRIRRPFSVL EVEALVQAVE KLGTGRWRDV KQRAFDNAKH  540
RTYVDLKDKW KTLVHTARIS PQQRRGEPVP QELLDRVLAA HAYWSQQQCK HQLKPL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2juh_A6e-564885961109Telomere binding protein TBP1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1250259QKMYPFKKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_32689
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150371e-102AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020237272.20.0telomere repeat-binding protein 5
TrEMBLA0A151RQT80.0A0A151RQT8_CAJCA; Telomere-binding protein 1
STRINGGLYMA18G39911.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF131882124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07540.14e-97TRF-like 2