PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_31478
Common NameKK1_031356
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 214aa    MW: 23959.9 Da    PI: 7.6383
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_31478genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.56.1e-1779129255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    +y+GVr+++ +g ++AeI+d ++   +  r++lg++  +eeAa a+++a+ k++g
  C.cajan_31478  79 HYRGVRQRP-WGTFAAEIWDSKK---TgGRVWLGTYKIEEEAALAYDKAAFKMHG 129
                    8********.**********544...238*************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.7E-2978138IPR001471AP2/ERF domain
CDDcd000181.27E-2978139No hitNo description
PfamPF008477.5E-1279129IPR001471AP2/ERF domain
SuperFamilySSF541713.2E-2079138IPR016177DNA-binding domain
PROSITE profilePS5103221.7279137IPR001471AP2/ERF domain
SMARTSM003805.9E-3279143IPR001471AP2/ERF domain
PRINTSPR003675.4E-128091IPR001471AP2/ERF domain
PRINTSPR003675.4E-12119139IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MDDTLYCDLP SLESVQNYML DLENDSNNLS IVSNNEIYHS PTYDPFLSPT LGMEGVHDVH  60
ACERPVDTLE VHTPPVCKHY RGVRQRPWGT FAAEIWDSKK TGGRVWLGTY KIEEEAALAY  120
DKAAFKMHGR KAKLNFPHLI DTHTSLEPVR IRKASKPDSS KPCSSFSSAP KRQGSKKRKN  180
TADLLNRLAT SRSQVQVFEM GSHANDADVN GGIN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-2678137160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1169178PKRQGSKKRK
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator and may be involved in disease resistance pathways. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_31478
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethephon (ethylene-releasing compound) in buds and to a lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by both protein kinases and protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020235369.11e-162ethylene-responsive transcription factor 2
SwissprotQ404792e-32ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBLA0A151RWY01e-161A0A151RWY0_CAJCA; Ethylene-responsive transcription factor 2
STRINGGLYMA03G26520.14e-76(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51233157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-31ethylene-responsive element binding factor 13
Publications ? help Back to Top
  1. Nakano T,Nishiuchi T,Suzuki K,Fujimura T,Shinshi H
    Studies on transcriptional regulation of endogenous genes by ERF2 transcription factor in tobacco cells.
    Plant Cell Physiol., 2006. 47(4): p. 554-8
    [PMID:16452120]