PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_31473
Common NameKK1_031351
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 210aa    MW: 23988.1 Da    PI: 9.3702
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_31473genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.4e-1967117255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    +y+GVr+++ +g+++AeIrdp++ng  +r++lg++ t+eeA  a++ a+ k++g
  C.cajan_31473  67 RYRGVRRRP-WGKFAAEIRDPKKNG--ARVWLGTYETEEEAGLAYDIAAFKMRG 117
                    8********.***********9998..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.95E-3266127No hitNo description
SMARTSM003805.3E-3767131IPR001471AP2/ERF domain
PfamPF008477.7E-1467117IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.2E-3167126IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-2267126IPR016177DNA-binding domain
PROSITE profilePS5103224.34267125IPR001471AP2/ERF domain
PRINTSPR003671.6E-136879IPR001471AP2/ERF domain
PRINTSPR003671.6E-13107127IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MSCDDFSSLE SIQHFLLAHE HDDSNPLENV SNNEMCYSQP YNSSPSPTLK EDSRAAREVH  60
APPVWKRYRG VRRRPWGKFA AEIRDPKKNG ARVWLGTYET EEEAGLAYDI AAFKMRGSKA  120
KLNFPHLIDS HMSLKPVKKI KTSKKNVSES FSLFSPTSET RESKKKKNLA DLLNKLAKNR  180
SQVQVFEMGF HANDAPVEQW WSELNGCVMV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-3066130468ATERF1
3gcc_A3e-3066130468ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. {ECO:0000269|PubMed:11950980}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_31473
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Strongly induced by wounding. Induced by Pseudomonas syringae tomato (both virulent and avirulent avrRpt2 strains), independently of PAD4. Also induced by methyl jasmonate (MeJA) independently of JAR1, but seems to not be affected by ethylene. Induction by salicylic acid (SA) is controlled by growth and/or developmental conditions, and seems to be more efficient and independent of PAD4 in older plants. {ECO:0000269|PubMed:11950980, ECO:0000269|PubMed:12068110}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020235399.11e-157ethylene-responsive transcription factor 13
SwissprotQ8L9K16e-35ERF99_ARATH; Ethylene-responsive transcription factor 13
TrEMBLA0A151RWY11e-156A0A151RWY1_CAJCA; Ethylene-responsive transcription factor 13
STRINGGLYMA03G26520.17e-92(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51233157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.14e-37ethylene-responsive element binding factor 13
Publications ? help Back to Top
  1. Maimbo M,Ohnishi K,Hikichi Y,Yoshioka H,Kiba A
    Induction of a small heat shock protein and its functional roles in Nicotiana plants in the defense response against Ralstonia solanacearum.
    Plant Physiol., 2007. 145(4): p. 1588-99
    [PMID:17965181]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]