PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_30472
Common NameKK1_033031
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 285aa    MW: 32664.8 Da    PI: 8.396
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_30472genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.33.4e-54101351128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                    lppGfrFhPtdeel+v+yL+++++++++++ ++i+evdiyk++Pw+Lp k + +e+ewyfFs+r++ky++g r+nrat sgyWkatg+dk+++s +
  C.cajan_30472  10 LPPGFRFHPTDEELIVYYLCNQATSRPCPA-SIIPEVDIYKFDPWELPDKSDFGENEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDKAIYS-G 103
                    79****************************.89***************888899****************************************.9 PP

            NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                    ++++g+kk Lvfykg+ pkg ktdW+mheyrl
  C.cajan_30472 104 SKHIGVKKALVFYKGKPPKGIKTDWIMHEYRL 135
                    99****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.45E-668162IPR003441NAC domain
PROSITE profilePS5100560.79110162IPR003441NAC domain
PfamPF023651.3E-2611135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009825Biological Processmultidimensional cell growth
GO:0009835Biological Processfruit ripening
GO:0009908Biological Processflower development
GO:0010150Biological Processleaf senescence
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MEGRTTTSVL PPGFRFHPTD EELIVYYLCN QATSRPCPAS IIPEVDIYKF DPWELPDKSD  60
FGENEWYFFS PRERKYPNGV RPNRATVSGY WKATGTDKAI YSGSKHIGVK KALVFYKGKP  120
PKGIKTDWIM HEYRLIGSRR QANRQIGSMR LDDWVLCRIY KKKNMGKSLE AREDYPISQI  180
NIAPANNDSD QHEVMKFPRT SSLTHLLEMD YLGPISHILS DGSFNSTFDF QINTDNGGID  240
PFVKPQLVEM PNNDPYASDS GKYQVKQNST LNPTIFVNQV YDQRG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A6e-72616413167NO APICAL MERISTEM PROTEIN
1ut4_B6e-72616413167NO APICAL MERISTEM PROTEIN
1ut7_A6e-72616413167NO APICAL MERISTEM PROTEIN
1ut7_B6e-72616413167NO APICAL MERISTEM PROTEIN
3swm_A6e-72616416170NAC domain-containing protein 19
3swm_B6e-72616416170NAC domain-containing protein 19
3swm_C6e-72616416170NAC domain-containing protein 19
3swm_D6e-72616416170NAC domain-containing protein 19
3swp_A6e-72616416170NAC domain-containing protein 19
3swp_B6e-72616416170NAC domain-containing protein 19
3swp_C6e-72616416170NAC domain-containing protein 19
3swp_D6e-72616416170NAC domain-containing protein 19
4dul_A6e-72616413167NAC domain-containing protein 19
4dul_B6e-72616413167NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence (developmental, light-induced and ABA-induced senescence) and regulates fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. Activates the expression of senescence and ABA associated genes including NCED1, ABCG40, CYP707A2, SAG113, SGR1 and PAO, by directly binding to their promoters. {ECO:0000269|PubMed:29760199}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00221DAPTransfer from AT1G69490Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_30472
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. Induced by abscisic acid (ABA). {ECO:0000269|PubMed:29760199}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ0287690.0DQ028769.1 Glycine max NAC domain protein NAC1 (NAC1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020236734.10.0NAC domain-containing protein 2 isoform X2
SwissprotK4BNG71e-115NAP2_SOLLC; NAC domain-containing protein 2
TrEMBLA0A151RSB40.0A0A151RSB4_CAJCA; NAC domain-containing protein 29
STRINGGLYMA01G06150.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41033262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-114NAC-like, activated by AP3/PI
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Ma X, et al.
    The NAC Transcription Factor SlNAP2 Regulates Leaf Senescence and Fruit Yield in Tomato.
    Plant Physiol., 2018. 177(3): p. 1286-1302
    [PMID:29760199]