PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_30334 | ||||||||
Common Name | KK1_032019 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | bHLH | ||||||||
Protein Properties | Length: 259aa MW: 30246.3 Da PI: 8.3742 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.5 | 3.1e-05 | 101 | 146 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er RR+r +++ L ++lP+ +K + ++ ++A + I Lq C.cajan_30334 101 HMINERMRRQRQRQCCLALHSMLPHG-----TKTDNNSVIQMAAKEIVRLQ 146 7899*********************7.....78889999999998887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 2.22E-10 | 93 | 160 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 10.258 | 96 | 145 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 7.7E-7 | 101 | 160 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence Send to blast |
MDRFFPEKLL GEIFWDGPLL STGQSDSVQY SQDIKGEEAF PLATGSAFVQ YRDLPRIKYP 60 LNGSNSQNMS KRMLAFLRKS WPVERNRVDE IENERERGFR HMINERMRRQ RQRQCCLALH 120 SMLPHGTKTD NNSVIQMAAK EIVRLQGCRE ELQRKNFELE AVDSNQGRGR RIQYLRVAHP 180 KCGIDSLIES LKCLKDQGVD TRGIKSTFSP QELFAQLEIE TDEVKDADVE WTTWRTHDEL 240 DRKLDCHARE GFNKKQKTI |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_30334 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020235960.1 | 0.0 | transcription factor bHLH92 isoform X1 | ||||
TrEMBL | A0A151RV15 | 0.0 | A0A151RV15_CAJCA; Transcription factor bHLH92 | ||||
STRING | GLYMA02G00290.1 | 1e-132 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12572 | 27 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43650.1 | 3e-31 | bHLH family protein |