PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_30091

Common Name

KK1_036870

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

HRT-like

Protein Properties

Length: 432aa MW: 48575.6 Da PI: 10.1313

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_30091	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	58.5	1.1e-18	261	291	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv+l+dGs+C+r+Pv++R RC eHKGmR+ C.cajan_30091 261 ICGVALGDGSICRRPPVEKRMRCPEHKGMRT 291 8*****************************5 PP
2	HRT-like	64.1	1.9e-20	322	352	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCG+il+dGs+C+rqPvkgRKRC+eHKGmRi C.cajan_30091 322 ICGIILNDGSTCRRQPVKGRKRCHEHKGMRI 352 8*****************************7 PP
3	HRT-like	61	1.8e-19	393	423	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCG+il+dGs+C+rqPvkgRKRC+eHKG+Ri C.cajan_30091 393 ICGIILNDGSTCRRQPVKGRKRCHEHKGRRI 423 8*****************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00465	4.6E-5	66	169	IPR000305	GIY-YIG nuclease superfamily
CDD	cd00719	0.00975	84	129	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:2000033	Biological Process	regulation of seed dormancy process
GO:0097100	Molecular Function	supercoiled DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence Send to blast
MVALKREQCN RTKHDSSFSH WKILIGPSDW EDHSKGKEGC ARYRIHNLPQ QSGPGVYELG 60 IAVSGTGLGR EIYKLVPHSH RIVVVYLGQA DNVRSRLQRY GRTGAHLDNN ASSDDSSLQK 120 GRPLFQEVFS QGFSIVYRWA SMQSKEDALR TEAQLLNTFD YAWNTSNNGT RRPDDILQNL 180 HKIASGTRTL SDVARALLPF TQKQVGIKIK SSKLPLADDK SDEADNGSYN FLPRVFNFNR 240 SRPRILQDTT GIAREHENAK ICGVALGDGS ICRRPPVEKR MRCPEHKGMR TNVHQNASQD 300 VEDPQQTSVG NPVDESLIST NICGIILNDG STCRRQPVKG RKRCHEHKGM RIHASIQTKG 360 NGYRYQNYSQ DVEVPPQSQV GSPFDNSVTN TTICGIILND GSTCRRQPVK GRKRCHEHKG 420 RRIRASFHVN QK

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence Send to blast

MVALKREQCN RTKHDSSFSH WKILIGPSDW EDHSKGKEGC ARYRIHNLPQ QSGPGVYELG  60
IAVSGTGLGR EIYKLVPHSH RIVVVYLGQA DNVRSRLQRY GRTGAHLDNN ASSDDSSLQK  120
GRPLFQEVFS QGFSIVYRWA SMQSKEDALR TEAQLLNTFD YAWNTSNNGT RRPDDILQNL  180
HKIASGTRTL SDVARALLPF TQKQVGIKIK SSKLPLADDK SDEADNGSYN FLPRVFNFNR  240
SRPRILQDTT GIAREHENAK ICGVALGDGS ICRRPPVEKR MRCPEHKGMR TNVHQNASQD  300
VEDPQQTSVG NPVDESLIST NICGIILNDG STCRRQPVKG RKRCHEHKGM RIHASIQTKG  360
NGYRYQNYSQ DVEVPPQSQV GSPFDNSVTN TTICGIILND GSTCRRQPVK GRKRCHEHKG  420
RRIRASFHVN QK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_30091

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020239993.1	0.0	protein EFFECTOR OF TRANSCRIPTION 2
TrEMBL	A0A151RGM0	0.0	A0A151RGM0_CAJCA; Uncharacterized protein
STRING	XP_007152922.1	0.0	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9409	31	39

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	2e-99	effector of transcription2