PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_30038
Common NameKK1_032324
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GRAS
Protein Properties Length: 524aa    MW: 59814 Da    PI: 4.6517
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_30038genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS139.63.3e-431525233374
           GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                    + L +  ea+ +g++ la+ ++  + + +sp  +p++Rla+y+ + + ++ ++  + +      +++    s++  a +k+f++  P  kf+h++a
  C.cajan_30038 152 HMLEALGEAIFQGEKPLAKVIMRCIMQKVSPISEPLERLAFYLCQDMMKTSQG--DCC----YLTQE---ASKNFEATFKAFYQGLPHGKFAHFVA 238
                    56777789999*********************************999998887..333....33333...36777788999*************** PP

           GRAS  99 NqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.......skeeleetgerLakfAeelgvpfefnvlvakrl 186
                    N aI ea+ ++ e +Hi+Dfd+++G QWp+L++a+a+      +l++T ++  e++       s  + e +++ L + A+++gv++  +    k +
  C.cajan_30038 239 NLAIIEALPHDcEVIHIVDFDMGEGSQWPPLIEAIATLH---KTLKLTSIKWGEESsegvcvsSPWRFEGIRRDLYEHARSCGVKLVVEG---KGI 328
                    ********8776999*********************975...56******876655668999888999******************9888...666 PP

           GRAS 187 edleleeLrvkp.....gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvv.....veqeadhnsesFlerflealeyysalfdsle 272
                    e++ ++eL+  +     +E la n+++ l ++   ++ ++++  e+L+l+ks   k vv      v +e++ ++ +F   f + l +y al++s+e
  C.cajan_30038 329 EEV-VSELKKMNkrggrREFLAFNCMVDLPHMG--RGRSRKHVMEFLDLIKSCGCKGVVTfgdgrVCEELENDDLEFRSFFERHLVHYKALLESVE 421
                    666.5555443335577***************9..77888889************97665233323467888999********************* PP

           GRAS 273 aklpres.eerikvErellgreivnvvacegaerrerhetlekWrerl.eeaGFkpvplsekaakqaklllrkvksdg..yrveee....sgslvl 360
                    + +p++  ++r+ +E  ++++ ++++   ++ e  e  e      + + +e G++   ls+ + +++k +l+ ++ +g  y+   e    +++l+l
  C.cajan_30038 422 SHFPNQFlDARTAMECLFVAPYVSSLAWLQKWE--EIIE-----DSYFkTEIGLEGCGLSNAILMEVKEMLNGCE-EGllYQARIEgkncDNQLIL 509
                    ****999999*******9999999999999888..3333.....23330579***********************.663455542244569***** PP

           GRAS 361 gWkdrpLvsvSaWr 374
                     Wk+ +Lv vS Wr
  C.cajan_30038 510 EWKGIQLVRVSIWR 523
                    *************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098519.311124498IPR005202Transcription factor GRAS
PfamPF035141.2E-40152523IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    Send to blast
MHPEILESPS CSSSFYQANT STIDLQFEHH GFLVDPSEFN SLFNTLEDTS SEASSLSLPS  60
IMFTNDNFVH YPIEKDIFQL PTLMDEYDYD LSMDFDEFDH MLRDDHHKSE VEDTTITWSP  120
TSSLNSDLSS NQKPLTLPHQ GMEIENQVSL PHMLEALGEA IFQGEKPLAK VIMRCIMQKV  180
SPISEPLERL AFYLCQDMMK TSQGDCCYLT QEASKNFEAT FKAFYQGLPH GKFAHFVANL  240
AIIEALPHDC EVIHIVDFDM GEGSQWPPLI EAIATLHKTL KLTSIKWGEE SSEGVCVSSP  300
WRFEGIRRDL YEHARSCGVK LVVEGKGIEE VVSELKKMNK RGGRREFLAF NCMVDLPHMG  360
RGRSRKHVME FLDLIKSCGC KGVVTFGDGR VCEELENDDL EFRSFFERHL VHYKALLESV  420
ESHFPNQFLD ARTAMECLFV APYVSSLAWL QKWEEIIEDS YFKTEIGLEG CGLSNAILME  480
VKEMLNGCEE GLLYQARIEG KNCDNQLILE WKGIQLVRVS IWRN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1334340LKKMNKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_30038
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020236232.10.0nodulation-signaling pathway 2 protein
TrEMBLA0A151RU910.0A0A151RU91_CAJCA; Nodulation-signaling pathway 2 protein
STRINGGLYMA03G06530.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42742761
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.18e-17RGA-like 2