PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_28642
Common NameKK1_028177
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GATA
Protein Properties Length: 314aa    MW: 35033.4 Da    PI: 8.7395
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_28642genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.59e-19232265134
           GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                    C +C +tkTp+WR+gp g+ktLCnaCG++yr+ +
  C.cajan_28642 232 CMHCEVTKTPQWREGPMGPKTLCNACGVRYRSGR 265
                    99*****************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF577161.47E-14226287No hitNo description
PROSITE profilePS5011411.754226262IPR000679Zinc finger, GATA-type
SMARTSM004018.7E-17226276IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.101.2E-14230263IPR013088Zinc finger, NHR/GATA-type
CDDcd002027.45E-15231278No hitNo description
PfamPF003201.3E-16232265IPR000679Zinc finger, GATA-type
PROSITE patternPS003440232257IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MKDSWFFDNN FNGLSDEIFD DVVNFFDFPL EDVEANAVEE DWDAQFKCPE DPRFDVFSAS  60
SAGGCAKTKN ENPQLGVGFS ASCDGISPIK QLAKAPEPTY GKTIPHQNVT FRGKDLHQFQ  120
TYSPVSVFES SSSSSVENSN FDRPVIRVKR VRSKRQRPSS FSPLFSTPFY LNLPALRKHQ  180
GTTASESDFG TNVAGNLSNK LKRQRKKDLT PLPDDVEMMR SSSLEPAAPR KCMHCEVTKT  240
PQWREGPMGP KTLCNACGVR YRSGRLFPEY RPAASPTFVA SLHSNCHKKV VEMRTRFRGS  300
SMLAPSNLHG NSVG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1199204KLKRQR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00130DAPTransfer from AT1G08010Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_28642
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0992130.0BT099213.1 Soybean clone JCVI-FLGm-23B6 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020232632.10.0GATA transcription factor 11
TrEMBLA0A151S5F90.0A0A151S5F9_CAJCA; GATA transcription factor 6
STRINGGLYMA12G29730.11e-178(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57582849
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.21e-46GATA transcription factor 11