PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_28593
Common NameKK1_027349
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GATA
Protein Properties Length: 342aa    MW: 36755.1 Da    PI: 5.8738
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_28593genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.22e-17248281134
           GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                    C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  C.cajan_28593 248 CLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 281
                    99*****************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0169921.7E-762336IPR016679Transcription factor, GATA, plant
PROSITE profilePS5011411.424242278IPR000679Zinc finger, GATA-type
SMARTSM004017.0E-17242292IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.14E-14246305No hitNo description
Gene3DG3DSA:3.30.50.101.5E-14246279IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.19E-13247294No hitNo description
PfamPF003204.3E-15248281IPR000679Zinc finger, GATA-type
PROSITE patternPS003440248273IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MVGNFIDDID CSSFFDHIDD LLDFPVEDAA TADNSAAAPV CPPASFWSAE SDSLPAADTV  60
FSGSAVPDLS AELSVPYEDI VQLEWLSNFV EDSFSCGSLT MKKEEPQCST KDDTAHTQFQ  120
TASPVSVLEA TTFSSGEKAA APRSPELYIP VPCGRARSKR PRPAAFNPHP VMQLISPASS  180
TGESTQHKAS PSSESENFAE SAIKPAKQAS GEHKKKKKIK VAQCSITKQW QEQNNAATAT  240
ATAAVRKCLH CEITKTPQWR AGPMGPKTLC NACGVRYKSG RLFPEYRPAA SPTFCAAVHS  300
NSHKKVLEMR NKTGTQSGFA NDSVASPELI PNTDASLSLE YM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158162KRPRP
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_28593
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150445e-88AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020231863.10.0GATA transcription factor 8
TrEMBLA0A151S7W70.0A0A151S7W7_CAJCA; GATA transcription factor
STRINGGLYMA02G08145.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF48873356
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.21e-41GATA transcription factor 11