PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_27774

Common Name

KK1_028997

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

CAMTA

Protein Properties

Length: 1070aa MW: 120676 Da PI: 5.3301

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_27774	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	179.9	3e-56	20	136	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 +e ++rwl++ ei++iL n++k++++ e+++ p+sgsl+L++rk++ryfrkDG++w+kkkdgktvrE+he+LK g+v+vl+cyYah+een++fqrr C.cajan_27774 20 SEaQHRWLRPAEICEILSNHKKFQIAPEPAHMPSSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHERLKAGSVDVLHCYYAHGEENENFQRR 115 4449****************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 +yw+Lee+l++ivlvhy++vk C.cajan_27774 116 TYWMLEEDLSHIVLVHYRQVK 136 ****************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51437	81.567	15	141	IPR005559	CG-1 DNA-binding domain
SMART	SM01076	3.1E-77	18	136	IPR005559	CG-1 DNA-binding domain
Pfam	PF03859	3.2E-49	21	134	IPR005559	CG-1 DNA-binding domain
SuperFamily	SSF81296	1.56E-16	487	572	IPR014756	Immunoglobulin E-set
Pfam	PF01833	1.5E-6	487	564	IPR002909	IPT domain
Gene3D	G3DSA:2.60.40.10	2.1E-4	487	561	IPR013783	Immunoglobulin-like fold
SuperFamily	SSF48403	3.58E-19	667	783	IPR020683	Ankyrin repeat-containing domain
CDD	cd00204	1.23E-15	669	781	No hit	No description
Gene3D	G3DSA:1.25.40.20	2.2E-19	669	785	IPR020683	Ankyrin repeat-containing domain
PROSITE profile	PS50297	19.863	672	793	IPR020683	Ankyrin repeat-containing domain
Pfam	PF12796	1.0E-8	694	789	IPR020683	Ankyrin repeat-containing domain
SMART	SM00248	0.0034	722	751	IPR002110	Ankyrin repeat
PROSITE profile	PS50088	9.671	722	754	IPR002110	Ankyrin repeat
SMART	SM00248	110	761	790	IPR002110	Ankyrin repeat
SuperFamily	SSF52540	7.97E-7	891	944	IPR027417	P-loop containing nucleoside triphosphate hydrolase
SMART	SM00015	12	894	916	IPR000048	IQ motif, EF-hand binding site
Pfam	PF00612	0.026	896	915	IPR000048	IQ motif, EF-hand binding site
PROSITE profile	PS50096	7.455	896	924	IPR000048	IQ motif, EF-hand binding site
SMART	SM00015	0.16	917	939	IPR000048	IQ motif, EF-hand binding site
PROSITE profile	PS50096	7.584	918	942	IPR000048	IQ motif, EF-hand binding site
Pfam	PF00612	0.0032	920	937	IPR000048	IQ motif, EF-hand binding site

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009409	Biological Process	response to cold
GO:0010150	Biological Process	leaf senescence
GO:0042742	Biological Process	defense response to bacterium
GO:0050832	Biological Process	defense response to fungus
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding
GO:0005516	Molecular Function	calmodulin binding

Sequence ? help Back to Top
Protein Sequence Length: 1070 aa Download sequence Send to blast
MAETRHYVLP SQLDIEQIIS EAQHRWLRPA EICEILSNHK KFQIAPEPAH MPSSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVREAHER LKAGSVDVLH CYYAHGEENE NFQRRTYWML 120 EEDLSHIVLV HYRQVKGTKA NSTCAKENEE SLPYAQQTDK IMPKTEVDTS LSSTLRPHSY 180 QVPSQTIDTS MNSSQASEYE EAESAFNNHA SSDFYPFLKL QLPVEKIKAQ PADSYCPRPL 240 IDDQEKLPVI PGVNYISLTQ GNKMKDIHNF GLTYESSKPF GLSSWEGILE NNAESQHVPF 300 QPLFPETQPD NMGFNSNFSQ GDEIMVPHLT TSITEQHENG SLIQAEGNWQ AYGVDSLRMS 360 SWPIDSVYSG STCEVSCSNC DKEVDFQNSL EQYLEGNRNP DGMEDTYFTF KDGPPAEEGL 420 KKLDSFNQWM SKELGDVEES NKQSTSNAYW DTVESENEVG STTIPSQGHL DNFVLDPSIS 480 HDQLFSIIDY SPSWAFEESE VKVIISGRFL RSQHEAEQCK WSCMFGEVEV PAEIIANGVL 540 CCLTPPHKAG RVPFYVTCSN RLSCSEVREF DFQVNYTQEA NTEGENRGST FDTFSIRFGE 600 MLSLGHAFPQ NSDSISASEK FPLISKISSL LRGDDDDWDK LLKLTLEKDF SPENLQEQLL 660 ENLLKDKLHA WLIQKITEDG KGPNVLDEGG QGVLHFAAAL GYDWALEPTI VAGVNVNFRD 720 VNGWTALHWA AFCGRERTVA FLISLGAAPG ALTDPCPEHP SGRTPADLAS ANGHKGIAGY 780 LAESSLSAHL TTLDLNRDVG ENSGAKVVQR LQNTAQVHDL DGPSYELSLK DSLAAVCNAT 840 QAAARIHQVF RMQSFQRKQQ KEYGDDKFGI SDERALSLVT VNVKSHKSGP RDEPVHAAAI 900 RIQNKFRSWK GRREFLMIRQ RIVKIQAHVR GHQVRKSCGK IIWSVGILEK VILRWRRKGS 960 GLRGFKSEAI SEGTMIQDAS STEDDFDFLK EGRKQTEHRL QKALARVKSM VQYPEARDQY 1020 HRLLNVVTEI QENQVKHESS SMSSEEPRDF SNLNDLEALL DDDIFMPTAT

Sequence ? help Back to Top

Protein Sequence Length: 1070 aa Download sequence Send to blast

MAETRHYVLP SQLDIEQIIS EAQHRWLRPA EICEILSNHK KFQIAPEPAH MPSSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVREAHER LKAGSVDVLH CYYAHGEENE NFQRRTYWML  120
EEDLSHIVLV HYRQVKGTKA NSTCAKENEE SLPYAQQTDK IMPKTEVDTS LSSTLRPHSY  180
QVPSQTIDTS MNSSQASEYE EAESAFNNHA SSDFYPFLKL QLPVEKIKAQ PADSYCPRPL  240
IDDQEKLPVI PGVNYISLTQ GNKMKDIHNF GLTYESSKPF GLSSWEGILE NNAESQHVPF  300
QPLFPETQPD NMGFNSNFSQ GDEIMVPHLT TSITEQHENG SLIQAEGNWQ AYGVDSLRMS  360
SWPIDSVYSG STCEVSCSNC DKEVDFQNSL EQYLEGNRNP DGMEDTYFTF KDGPPAEEGL  420
KKLDSFNQWM SKELGDVEES NKQSTSNAYW DTVESENEVG STTIPSQGHL DNFVLDPSIS  480
HDQLFSIIDY SPSWAFEESE VKVIISGRFL RSQHEAEQCK WSCMFGEVEV PAEIIANGVL  540
CCLTPPHKAG RVPFYVTCSN RLSCSEVREF DFQVNYTQEA NTEGENRGST FDTFSIRFGE  600
MLSLGHAFPQ NSDSISASEK FPLISKISSL LRGDDDDWDK LLKLTLEKDF SPENLQEQLL  660
ENLLKDKLHA WLIQKITEDG KGPNVLDEGG QGVLHFAAAL GYDWALEPTI VAGVNVNFRD  720
VNGWTALHWA AFCGRERTVA FLISLGAAPG ALTDPCPEHP SGRTPADLAS ANGHKGIAGY  780
LAESSLSAHL TTLDLNRDVG ENSGAKVVQR LQNTAQVHDL DGPSYELSLK DSLAAVCNAT  840
QAAARIHQVF RMQSFQRKQQ KEYGDDKFGI SDERALSLVT VNVKSHKSGP RDEPVHAAAI  900
RIQNKFRSWK GRREFLMIRQ RIVKIQAHVR GHQVRKSCGK IIWSVGILEK VILRWRRKGS  960
GLRGFKSEAI SEGTMIQDAS STEDDFDFLK EGRKQTEHRL QKALARVKSM VQYPEARDQY  1020
HRLLNVVTEI QENQVKHESS SMSSEEPRDF SNLNDLEALL DDDIFMPTAT

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
4hb5_A	3e-12	661	810	13	157	Engineered Protein
4hb5_B	3e-12	661	810	13	157	Engineered Protein
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3'. Binds calmodulin in a calcium-dependent manner in vitro (PubMed:12218065). Regulates transcriptional activity in response to calcium signals (Probable). Involved in freezing tolerance in association with CAMTA1 and CAMTA2 (PubMed:23581962). Required for the cold-induced expression of DREB1B/CBF1, DREB1C/CBF2, ZAT12 and GOLS3 (PubMed:19270186). Involved in response to cold. Contributes together with CAMTA5 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:28351986). Involved together with CAMTA2 and CAMTA4 in the positive regulation of a general stress response (GSR) (PubMed:25039701). Involved in the regulation of GSR amplitude downstream of MEKK1 (PubMed:25157030). Involved in the regulation of a set of genes involved in defense responses against pathogens (PubMed:18298954). Involved in the regulation of both basal resistance and systemic acquired resistance (SAR) (PubMed:21900483). Acts as negative regulator of plant immunity (PubMed:19122675, PubMed:21900483, PubMed:22345509, PubMed:28407487). Binds to the promoter of the defense-related gene EDS1 and represses its expression (PubMed:19122675). Binds to the promoter of the defense-related gene NDR1 and represses its expression (PubMed:22345509). Involved in defense against insects (PubMed:23072934, PubMed:22371088). Required for tolerance to the generalist herbivore Trichoplusia ni, and contributes to the positive regulation of genes associated with glucosinolate metabolism (PubMed:23072934). Required for tolerance to Bradysia impatiens larvae. Mediates herbivore-induced wound response (PubMed:22371088). Required for wound-induced jasmonate accumulation (PubMed:23072934, PubMed:22371088). Involved in the regulation of ethylene-induced senescence by binding to the promoter of the senescence-inducer gene EIN3 and repressing its expression (PubMed:22345509). {ECO:0000269\|PubMed:12218065, ECO:0000269\|PubMed:18298954, ECO:0000269\|PubMed:19122675, ECO:0000269\|PubMed:19270186, ECO:0000269\|PubMed:21900483, ECO:0000269\|PubMed:22345509, ECO:0000269\|PubMed:22371088, ECO:0000269\|PubMed:23072934, ECO:0000269\|PubMed:23581962, ECO:0000269\|PubMed:25039701, ECO:0000269\|PubMed:25157030, ECO:0000269\|PubMed:28351986, ECO:0000269\|PubMed:28407487, ECO:0000305\|PubMed:11925432}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00042	PBM	Transfer from AT2G22300	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_27774

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By heat shock, UVB, salt, wounding, ethylene and methyl jasmonate (PubMed:11162426, PubMed:12218065). Induced by infection with the fungal pathogen Golovinomyces cichoracearum (powdery mildew) and the bacterial pathogen Pseudomonas syringae pv tomato strain DC3000 (PubMed:22345509). {ECO:0000269\|PubMed:11162426, ECO:0000269\|PubMed:12218065, ECO:0000269\|PubMed:22345509}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015034	0.0	AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020233265.1	0.0	calmodulin-binding transcription activator 3 isoform X1
Swissprot	Q8GSA7	0.0	CMTA3_ARATH; Calmodulin-binding transcription activator 3
TrEMBL	A0A151S369	0.0	A0A151S369_CAJCA; Calmodulin-binding transcription activator 3
STRING	GLYMA08G14370.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8284	27	35

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	signal responsive 1

Publications ? help Back to Top
Zhang L,Du L,Shen C,Yang Y,Poovaiah BW Regulation of plant immunity through ubiquitin-mediated modulation of Ca(2+) -calmodulin-AtSR1/CAMTA3 signaling. Plant J., 2014. 78(2): p. 269-81 [PMID:24528504] Benn G, et al. A key general stress response motif is regulated non-uniformly by CAMTA transcription factors. Plant J., 2014. 80(1): p. 82-92 [PMID:25039701] Rahman H,Yang J,Xu YP,Munyampundu JP,Cai XZ Phylogeny of Plant CAMTAs and Role of AtCAMTAs in Nonhost Resistance to Xanthomonas oryzae pv. oryzae. Front Plant Sci, 2016. 7: p. 177 [PMID:26973658] Benn G, et al. Plastidial metabolite MEcPP induces a transcriptionally centered stress-response hub via the transcription factor CAMTA3. Proc. Natl. Acad. Sci. U.S.A., 2016. 113(31): p. 8855-60 [PMID:27432993] Kidokoro S, et al. Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature. Plant Cell, 2017. 29(4): p. 760-774 [PMID:28351986] Lolle S, et al. Matching NLR Immune Receptors to Autoimmunity in camta3 Mutants Using Antimorphic NLR Alleles. Cell Host Microbe, 2017. 21(4): p. 518-529.e4 [PMID:28407487] Kim YS, et al. CAMTA-Mediated Regulation of Salicylic Acid Immunity Pathway Genes in Arabidopsis Exposed to Low Temperature and Pathogen Infection. Plant Cell, 2017. 29(10): p. 2465-2477 [PMID:28982964] Jacob F, et al. A dominant-interfering camta3 mutation compromises primary transcriptional outputs mediated by both cell surface and intracellular immune receptors in Arabidopsis thaliana. New Phytol., 2018. 217(4): p. 1667-1680 [PMID:29226970]