PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_27743 | ||||||||
Common Name | KK1_031212 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | Nin-like | ||||||||
Protein Properties | Length: 125aa MW: 14843.3 Da PI: 10.1321 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 81.1 | 1.1e-25 | 2 | 49 | 5 | 52 |
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +s +++s+yF++pi +AA+eL+v+lT LK++CR++GI+RWPhRk+ sl C.cajan_27743 2 LSRKTVSEYFYMPISQAARELNVGLTHLKKRCRELGIQRWPHRKLMSL 49 68899****************************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 17.45 | 1 | 69 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 2.5E-21 | 2 | 49 | IPR003035 | RWP-RK domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0051302 | Biological Process | regulation of cell division |
Sequence ? help Back to Top |
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Protein Sequence Length: 125 aa Download sequence Send to blast |
MLSRKTVSEY FYMPISQAAR ELNVGLTHLK KRCRELGIQR WPHRKLMSLQ TLIKNIQEQG 60 EGYENDEKIR AAIEVLEREK RMVEEMPDLQ LGDNTRRLRQ ACFKANYKKR KLMGMHEVHE 120 TTISP |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_27743 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015035 | 2e-42 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020235220.1 | 1e-87 | protein RKD1 | ||||
Swissprot | Q9M9U9 | 9e-51 | RKD1_ARATH; Protein RKD1 | ||||
TrEMBL | A0A151RXB0 | 4e-88 | A0A151RXB0_CAJCA; Uncharacterized protein | ||||
STRING | GLYMA04G33516.1 | 1e-69 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6184 | 30 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18790.1 | 4e-53 | RWP-RK domain-containing protein |