PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_27514
Common NameKK1_031457
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 386aa    MW: 44054.2 Da    PI: 6.5563
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_27514genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.7e-19196246256
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  C.cajan_27514 196 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 246
                    59******9.**********955...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.11E-33195255No hitNo description
SuperFamilySSF541719.15E-23196254IPR016177DNA-binding domain
PROSITE profilePS5103223.024196253IPR001471AP2/ERF domain
SMARTSM003802.7E-40196259IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.9E-32196254IPR001471AP2/ERF domain
PfamPF008472.1E-12197246IPR001471AP2/ERF domain
PRINTSPR003676.1E-11197208IPR001471AP2/ERF domain
PRINTSPR003676.1E-11219235IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009651Biological Processresponse to salt stress
GO:2000070Biological Processregulation of response to water deprivation
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MEGLHESHDH KVFAESEEWE KEKGKGLALS SERRQWKPPF DDASVSHRPL KKIRSPQRQN  60
PNQPLLSLQP PSSRIVFPFA FEGSQHPMPF PHPFGTTPNL PLFPPPLHPT QQMISFGPQH  120
NMGYPPFIAP DSTMPHQHLQ HHHQQHHQHQ QQQQLLQYWS DALNLSPRGR MMMMVNRTEG  180
RPMLRPQVQP LNATKLYRGV RQRHWGKWVA EIRLPRNRTR LWLGTFDTAE DAAMAYDREA  240
FKLRGENAKL NFPELFLNKD KAESSTTAPV NAEGSTSTSK QPEVIPEETN TESEDMPPTV  300
TEENAETEEG NSQPQELVWG EWFNAIPAGW GPGSPVWDDL LLHSQLPFVN QNQQEFHDAG  360
VNQTQQEGNN TGPGSPSSSC PMRPFF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-20195253160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A1e-20195253463ATERF1
3gcc_A1e-20195253463ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_27514
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150391e-175AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020235495.10.0ethylene-responsive transcription factor ERF054
TrEMBLA0A151RWM40.0A0A151RWM4_CAJCA; Ethylene-responsive transcription factor ERF053 family
STRINGGLYMA06G45010.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42683258
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.13e-62ERF family protein