PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_26806
Common NameKK1_027995
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 479aa    MW: 53420.6 Da    PI: 5.5655
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_26806genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.54.8e-13284330354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    ++h + E++RR+++N ++  Lr+l+P++     +K + a+++  A++YI++L
  C.cajan_26806 284 TKHFATEKQRREQLNGKYKILRSLIPNP-----TKIDRASVVGDAIDYIREL 330
                    79**************************.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.89E-15279343IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.25281330IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-10284330IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.54E-12284330No hitNo description
Gene3DG3DSA:4.10.280.102.3E-11284339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-10287336IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 479 aa     Download sequence    Send to blast
MHEQSGCFDP NTMGESVTSL KDNFPQNPLP PSPMVVVGNT TNSNSFEENL KLSVDELSYN  60
HHNPEDVSTY ANGVTASSID ISHPQHLGLN MGNTFNNNNN NMDNHLVQEV IDALSYQHST  120
WDQESQDMAY ANHTQQQQQP NEQQFQQSQS YNPSSILDPP YPSPDLLNLL HLPRCSASSL  180
LTNPTPNFQN PMAFLGEFPI GSDNTSACAS SVLYDPLFHL NLPPQPPALR ELFQSLPRGY  240
SLPTNSRNGS LFGGGDEMEP DDMGVLEFNR VTPSVAKGRG GKATKHFATE KQRREQLNGK  300
YKILRSLIPN PTKIDRASVV GDAIDYIREL IRTVNELKLL VEKKRYGKER CKRPKTEEDA  360
AESCNIKPFS DPDGGIRTSW LQRKSKDSEV DVRIIDDDVT IKLFQRKKIN CLVFVSKVLD  420
ELQLELHHVA GGHVGEYCSF LFNSKIIEGS SVYASAIANR VIDVLDTQYA AAVPHTNSY
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00285DAPTransfer from AT2G31220Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_26806
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2358831e-163AC235883.2 Glycine max clone GM_WBc0013D02, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020232475.20.0transcription factor bHLH89
RefseqXP_029130106.10.0transcription factor bHLH89
TrEMBLA0A151S6A10.0A0A151S6A1_CAJCA; Transcription factor bHLH10
STRINGXP_007163873.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37433262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31220.17e-80bHLH family protein