PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_25793
Common NameKK1_025802
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 182aa    MW: 19910.1 Da    PI: 4.3191
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_25793genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.44.9e-152441055
            AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   +++g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  C.cajan_25793  2 RNWGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 44
                   57**********843...6***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.8E-26153IPR001471AP2/ERF domain
PROSITE profilePS5103219.994152IPR001471AP2/ERF domain
CDDcd000189.29E-26154No hitNo description
SMARTSM003801.0E-27158IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-17253IPR016177DNA-binding domain
PfamPF008471.5E-9244IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MRNWGKWVSE IREPRKKSRI WLGTFPTPEM AARAHDVAAL SIKGSGAILN FPELASSLPR  60
PASLAPRDVQ AAATRAAHMD FSSSSSSSSS SFISSSSSSL SSLVSAADLS TASEELSEII  120
ELPRLETSYE LGNEFVFVDS QDTWMYQPPL TPWLQTANCD ENEFAVTESG VATSFESFLW  180
DY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-142532173Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_25793
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150361e-59AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020230470.11e-129ethylene-responsive transcription factor TINY
SwissprotQ9LYD31e-59DREB3_ARATH; Dehydration-responsive element-binding protein 3
TrEMBLA0A151SBZ41e-127A0A151SBZ4_CAJCA; Dehydration-responsive element-binding protein 3
STRINGXP_007161494.12e-84(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19234263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-56ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Galuschka C,Schindler M,Bülow L,Hehl R
    AthaMap web tools for the analysis and identification of co-regulated genes.
    Nucleic Acids Res., 2007. 35(Database issue): p. D857-62
    [PMID:17148485]