PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_25567
Common NameKK1_026324
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 383aa    MW: 42286.7 Da    PI: 8.1868
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_25567genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H222.43.2e-07216238123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    + C+ Cgk F+r  nL+ H+r H
  C.cajan_25567 216 HYCQVCGKGFKRDANLRMHMRAH 238
                    68*******************99 PP
2zf-C2H210.80.0015309332123
                    EEETTTT.EEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCg.ksFsrksnLkrHirtH 23 
                    y+C+ C+ k Fs  s+L++H + +
  C.cajan_25567 309 YVCKRCNqKQFSVLSDLRTHEKHC 332
                    9*******************9876 PP
3zf-C2H210.70.0017340355520
                    TTTEEESSHHHHHHHH CS
        zf-C2H2   5 dCgksFsrksnLkrHi 20 
                     Cg+sFsrk+ L+ H 
  C.cajan_25567 340 TCGTSFSRKDKLMGHV 355
                    6************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576675.15E-6214241No hitNo description
Gene3DG3DSA:3.30.160.603.5E-7216275IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003550.0034216238IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015712.653216243IPR007087Zinc finger, C2H2
PROSITE patternPS000280218238IPR007087Zinc finger, C2H2
SMARTSM00355160271304IPR015880Zinc finger, C2H2-like
SMARTSM0035523309331IPR015880Zinc finger, C2H2-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MFPEPPQDLV LPSLETNSSS ASASASTSAS GSQSSSLLFN LSILKDKLSE VQTLVSVILS  60
PNQCLPESTS MAISSMNSTI HEIIVTATSM MFTCQHMALT TLPGTNSNTT TCTNKLHHQN  120
KLLPHSNNFG TNTSVLGNNT DTNIIDPNQG LFSSTESDAL DWFTESYDNN HDNSNISRIK  180
EDDPSVSISE NNRGLSANNS DIIELDAADL LAKYTHYCQV CGKGFKRDAN LRMHMRAHGD  240
EYKTNAALSN PMKSLEGGKD QCLMSVKAKR YSCPQEGCRW NQRHAKFQPL KSMICAKNHY  300
KRSHCPKMYV CKRCNQKQFS VLSDLRTHEK HCGDLKWQCT CGTSFSRKDK LMGHVALFVG  360
HQPAIINNGL SYSAKLIGAP RTH
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. Together with STOP1, plays a critical role in tolerance to major stress factors in acid soils such as proton H(+) and aluminum ion Al(3+). Required for the expression of genes in response to acidic stress (e.g. ALMT1 and MATE), and Al-activated citrate exudation. {ECO:0000269|PubMed:23935008}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00522DAPTransfer from AT5G22890Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_25567
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020231018.10.0protein SENSITIVE TO PROTON RHIZOTOXICITY 2
SwissprotQ0WT241e-106STOP2_ARATH; Protein SENSITIVE TO PROTON RHIZOTOXICITY 2
TrEMBLA0A151SAJ50.0A0A151SAJ5_CAJCA; Protein SENSITIVE TO PROTON RHIZOTOXICITY 1
STRINGXP_007150139.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80993045
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22890.11e-106C2H2 family protein