PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_24883
Common NameKK1_024981
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 336aa    MW: 37615.3 Da    PI: 6.8044
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_24883genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.8e-13164211355
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    + h ++Er+RR+++ ++f  L  ++P +     kK++Ka++Le A++Y+k+Lq
  C.cajan_24883 164 QDHVIAERKRREKLSQRFIALSAIVPGL-----KKMDKATVLEDAIKYVKQLQ 211
                    6799************************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.586161210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.7E-11164211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-17165221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-16166221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.74E-12166215No hitNo description
SMARTSM003534.2E-15167216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MEDPTLFHQY PMDPFAFQLE DVDFESLSAS PMSSSSHKRF NSESTQNSSL TQSPEQSVAP  60
ARPTKQPKTW SAYGSDMMAP KVSSSKIISF ENSNASSVSS RQFYNLDAAK LKKPKIETGY  120
GENFDFTAMV SQGLYDDNSF LDYDNREKKL MAATTTTRNP IQAQDHVIAE RKRREKLSQR  180
FIALSAIVPG LKKMDKATVL EDAIKYVKQL QERVKTLEEQ AVDKTVESAV FIKRSVVFTG  240
DESSSSGEES DQSLPEIEAR ISGKQVLIRI HCDKHSGQAA TILKELEKHN LTVQSSSFLP  300
FGNNTLDISI VAQMNKEYSL TAKDLIRSLS QCLRQL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1169174ERKRRE
2170175RKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_24883
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020229616.10.0transcription factor bHLH19
TrEMBLA0A151SEJ90.0A0A151SEJ9_CAJCA; Transcription factor bHLH19
STRINGXP_007155781.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45534164
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.17e-53bHLH family protein